Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC044860.2-201ENST00000561005 179 ntBASIC9.61□□□□□ -0.87
CFAP43Q8NDM7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
CFAP43Q8NDM7 AC092944.2-201ENST00000605443 889 ntBASIC9.61□□□□□ -0.87
CFAP43Q8NDM7 AC119674.1-217ENST00000641942 1086 ntBASIC9.61□□□□□ -0.87
CFAP43Q8NDM7 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 MFSD8-218ENST00000641186 4448 ntBASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 RNU1-19P-201ENST00000363306 165 ntBASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 VN1R110P-201ENST00000438988 971 ntBASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 H2AFZP6-201ENST00000444403 394 ntBASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 FTLP8-201ENST00000446770 267 ntBASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 AL021368.3-201ENST00000607119 578 ntBASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 AL035661.1-201ENST00000620459 1144 ntBASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 MAPK10-365ENST00000641902 3825 ntBASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
CFAP43Q8NDM7 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 AC092725.2-201ENST00000567658 1389 ntBASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 RNA5SP156-201ENST00000410250 110 ntBASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 AC245096.1-201ENST00000413104 546 ntBASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 MORF4-201ENST00000447135 971 ntBASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 ST13P12-201ENST00000508958 1094 ntBASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 AC073916.1-201ENST00000545095 130 ntBASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 MIR6748-201ENST00000610433 71 ntBASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
CFAP43Q8NDM7 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 KIF4CP-201ENST00000422742 1279 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AC016027.4-201ENST00000450866 277 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 RN7SL610P-201ENST00000463845 291 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AL122020.1-201ENST00000472287 459 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 MIR7155-201ENST00000615925 56 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 FTO-215ENST00000636491 1676 ntTSL 5 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 PABPC1P6-201ENST00000445594 1829 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 MIR433-201ENST00000384837 93 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 MIR585-201ENST00000384887 94 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 NMD3P2-201ENST00000421815 761 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 TRIM60P16-201ENST00000444048 694 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AL445466.1-201ENST00000448432 357 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 YWHAEP1-201ENST00000453697 763 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 CYCSP22-201ENST00000517555 339 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AC015802.2-201ENST00000589690 189 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 AC116651.1-201ENST00000609724 556 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 TCL6_3.1-201ENST00000619064 137 ntBASIC9.58□□□□□ -0.88
CFAP43Q8NDM7 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 AC127024.8-201ENST00000623719 2094 ntBASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
CFAP43Q8NDM7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms