Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNF2P1-201ENST00000442955 1010 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AC009963.4-201ENST00000448535 339 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.16□□□□□ -1.42
RAE1P78406 RPL12P7-201ENST00000493832 494 ntBASIC6.16□□□□□ -1.42
RAE1P78406 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.16□□□□□ -1.42
RAE1P78406 AC108157.1-201ENST00000510511 539 ntBASIC6.16□□□□□ -1.42
RAE1P78406 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 NPM1P52-201ENST00000518264 846 ntBASIC6.16□□□□□ -1.42
RAE1P78406 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RAE1P78406 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.16□□□□□ -1.42
RAE1P78406 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 AC074029.2-201ENST00000551045 634 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AC089984.3-201ENST00000552838 363 ntBASIC6.16□□□□□ -1.42
RAE1P78406 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 AC027176.2-201ENST00000559166 746 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 OR4C49P-201ENST00000563891 900 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AC068408.1-201ENST00000577406 1144 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.16□□□□□ -1.42
RAE1P78406 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 AC114477.1-201ENST00000605097 605 ntBASIC6.16□□□□□ -1.42
RAE1P78406 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AL445649.1-201ENST00000615941 691 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AC074276.2-201ENST00000619891 348 ntBASIC6.16□□□□□ -1.42
RAE1P78406 LINC00216-201ENST00000623548 1126 ntBASIC6.16□□□□□ -1.42
RAE1P78406 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RAE1P78406 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.16□□□□□ -1.42
RAE1P78406 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 ZNF812P-201ENST00000457674 1694 ntBASIC6.16□□□□□ -1.42
RAE1P78406 AC011815.2-201ENST00000618230 2021 ntBASIC6.16□□□□□ -1.42
RAE1P78406 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.16□□□□□ -1.42
RAE1P78406 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RAE1P78406 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
RAE1P78406 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RAE1P78406 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.16□□□□□ -1.42
RAE1P78406 AC022507.1-201ENST00000548349 1505 ntBASIC6.15□□□□□ -1.42
RAE1P78406 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RAE1P78406 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
RAE1P78406 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
RAE1P78406 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RAE1P78406 AC019178.1-201ENST00000392337 440 ntBASIC6.15□□□□□ -1.42
RAE1P78406 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RAE1P78406 MRPS21P5-201ENST00000417885 231 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.15□□□□□ -1.42
RAE1P78406 AC006509.1-201ENST00000420788 634 ntBASIC6.15□□□□□ -1.42
RAE1P78406 SFR1P2-201ENST00000421841 730 ntBASIC6.15□□□□□ -1.42
RAE1P78406 MED28P4-201ENST00000433137 572 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.15□□□□□ -1.42
RAE1P78406 AL020997.1-201ENST00000446554 349 ntBASIC6.15□□□□□ -1.42
RAE1P78406 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
RAE1P78406 FTH1P8-201ENST00000498161 514 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AC131392.1-201ENST00000506490 633 ntBASIC6.15□□□□□ -1.42
RAE1P78406 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.15□□□□□ -1.42
RAE1P78406 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.15□□□□□ -1.42
RAE1P78406 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.15□□□□□ -1.42
RAE1P78406 AP005639.1-201ENST00000526939 192 ntBASIC6.15□□□□□ -1.42
RAE1P78406 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.15□□□□□ -1.42
RAE1P78406 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.15□□□□□ -1.42
RAE1P78406 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RAE1P78406 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.15□□□□□ -1.42
RAE1P78406 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.15□□□□□ -1.42
RAE1P78406 AC092718.4-201ENST00000566639 716 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.15□□□□□ -1.42
RAE1P78406 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.15□□□□□ -1.42
RAE1P78406 AC019257.2-201ENST00000605539 497 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AL512413.1-201ENST00000606489 382 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AC120053.1-201ENST00000607706 736 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AC034229.4-201ENST00000607861 441 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.15□□□□□ -1.42
RAE1P78406 AL356608.1-201ENST00000610034 820 ntBASIC6.15□□□□□ -1.42
RAE1P78406 MIR7854-201ENST00000620068 65 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AC007204.1-201ENST00000621794 555 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AL049777.1-201ENST00000622740 518 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AL132640.3-201ENST00000630473 177 ntBASIC6.15□□□□□ -1.42
RAE1P78406 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RAE1P78406 AC004023.1-201ENST00000561473 1744 ntBASIC6.15□□□□□ -1.42
RAE1P78406 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RAE1P78406 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.15□□□□□ -1.43
RAE1P78406 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.15□□□□□ -1.43
RAE1P78406 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.15□□□□□ -1.43
RAE1P78406 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.15□□□□□ -1.43
RAE1P78406 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RAE1P78406 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
RAE1P78406 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.15□□□□□ -1.43
RAE1P78406 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RAE1P78406 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.15□□□□□ -1.43
RAE1P78406 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RAE1P78406 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RAE1P78406 AL021877.2-201ENST00000624442 10684 ntBASIC6.15□□□□□ -1.43
RAE1P78406 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.15□□□□□ -1.43
RAE1P78406 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RAE1P78406 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms