Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
YBX1P67809 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 SFR1P1-201ENST00000403720 688 ntBASIC6.89□□□□□ -1.31
YBX1P67809 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.89□□□□□ -1.31
YBX1P67809 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.89□□□□□ -1.31
YBX1P67809 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.89□□□□□ -1.31
YBX1P67809 ARL2BPP3-201ENST00000421226 480 ntBASIC6.89□□□□□ -1.31
YBX1P67809 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.89□□□□□ -1.31
YBX1P67809 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 FDPSP6-201ENST00000425091 512 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC093422.3-201ENST00000428506 305 ntBASIC6.89□□□□□ -1.31
YBX1P67809 ANXA2P2-201ENST00000435128 1020 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.89□□□□□ -1.31
YBX1P67809 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 NPM1P33-201ENST00000438918 872 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AL031667.1-201ENST00000440222 725 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC027124.1-201ENST00000440852 466 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC009237.4-201ENST00000441078 238 ntBASIC6.89□□□□□ -1.31
YBX1P67809 UBE2D3P4-201ENST00000441973 436 ntBASIC6.89□□□□□ -1.31
YBX1P67809 TXNP2-201ENST00000443918 295 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AL158214.1-201ENST00000444423 404 ntBASIC6.89□□□□□ -1.31
YBX1P67809 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
YBX1P67809 OR51P1P-201ENST00000447547 942 ntBASIC6.89□□□□□ -1.31
YBX1P67809 GAPDHP16-201ENST00000448152 962 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.89□□□□□ -1.31
YBX1P67809 PTGES3P5-201ENST00000455109 434 ntBASIC6.89□□□□□ -1.31
YBX1P67809 MED28P7-201ENST00000456611 530 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.89□□□□□ -1.31
YBX1P67809 RPL21P18-201ENST00000469899 480 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AL135933.1-201ENST00000498657 802 ntBASIC6.89□□□□□ -1.31
YBX1P67809 OR5H3P-201ENST00000502817 919 ntBASIC6.89□□□□□ -1.31
YBX1P67809 NACAP6-201ENST00000509572 622 ntBASIC6.89□□□□□ -1.31
YBX1P67809 PGAM4P2-201ENST00000512491 721 ntBASIC6.89□□□□□ -1.31
YBX1P67809 RN7SKP242-201ENST00000515967 289 ntBASIC6.89□□□□□ -1.31
YBX1P67809 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.89□□□□□ -1.31
YBX1P67809 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC107952.1-201ENST00000524200 376 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.89□□□□□ -1.31
YBX1P67809 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.89□□□□□ -1.31
YBX1P67809 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.89□□□□□ -1.31
YBX1P67809 AC092865.1-201ENST00000544395 1023 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC023050.2-201ENST00000544968 387 ntBASIC6.89□□□□□ -1.31
YBX1P67809 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.89□□□□□ -1.31
YBX1P67809 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.89□□□□□ -1.31
YBX1P67809 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.89□□□□□ -1.31
YBX1P67809 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.89□□□□□ -1.31
YBX1P67809 MIMT1-201ENST00000597105 1050 ntBASIC6.89□□□□□ -1.31
YBX1P67809 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC067773.1-201ENST00000603284 1094 ntBASIC6.89□□□□□ -1.31
YBX1P67809 OR2AS2P-201ENST00000606902 342 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AL096803.3-201ENST00000609032 532 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 AP005329.3-201ENST00000609924 686 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 AC092106.3-201ENST00000611308 722 ntBASIC6.89□□□□□ -1.31
YBX1P67809 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 AL603755.1-201ENST00000619504 163 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.89□□□□□ -1.31
YBX1P67809 AL157770.1-201ENST00000623049 439 ntBASIC6.89□□□□□ -1.31
YBX1P67809 AC034229.6-201ENST00000623704 224 ntBASIC6.89□□□□□ -1.31
YBX1P67809 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
YBX1P67809 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.89□□□□□ -1.31
YBX1P67809 AP002800.1-201ENST00000624982 2225 ntBASIC6.89□□□□□ -1.31
YBX1P67809 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.89□□□□□ -1.31
YBX1P67809 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.88□□□□□ -1.31
YBX1P67809 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
YBX1P67809 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.88□□□□□ -1.31
YBX1P67809 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.88□□□□□ -1.31
YBX1P67809 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.88□□□□□ -1.31
YBX1P67809 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
YBX1P67809 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
YBX1P67809 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
YBX1P67809 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.88□□□□□ -1.31
YBX1P67809 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.88□□□□□ -1.31
YBX1P67809 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
YBX1P67809 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
YBX1P67809 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
YBX1P67809 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.88□□□□□ -1.31
YBX1P67809 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.88□□□□□ -1.31
YBX1P67809 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
YBX1P67809 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms