Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC002519.2-203ENST00000567043 837 ntBASIC8.2□□□□□ -1.1
RIPK4P57078 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.2□□□□□ -1.1
RIPK4P57078 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.2□□□□□ -1.1
RIPK4P57078 AC097641.3-201ENST00000613523 464 ntBASIC8.2□□□□□ -1.1
RIPK4P57078 TCL6_3.1-201ENST00000619064 137 ntBASIC8.2□□□□□ -1.1
RIPK4P57078 AC073592.6-201ENST00000624271 415 ntBASIC8.2□□□□□ -1.1
RIPK4P57078 AC073593.1-201ENST00000624500 411 ntBASIC8.2□□□□□ -1.1
RIPK4P57078 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RIPK4P57078 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RIPK4P57078 AP000641.1-201ENST00000531988 1639 ntBASIC8.2□□□□□ -1.1
RIPK4P57078 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.2□□□□□ -1.1
RIPK4P57078 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.2□□□□□ -1.1
RIPK4P57078 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RIPK4P57078 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RIPK4P57078 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RIPK4P57078 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.2□□□□□ -1.1
RIPK4P57078 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC8.2□□□□□ -1.1
RIPK4P57078 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
RIPK4P57078 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
RIPK4P57078 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RIPK4P57078 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.19□□□□□ -1.1
RIPK4P57078 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
RIPK4P57078 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RIPK4P57078 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RIPK4P57078 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RIPK4P57078 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RIPK4P57078 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RIPK4P57078 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.19□□□□□ -1.1
RIPK4P57078 PSMD10P2-201ENST00000432890 672 ntBASIC8.19□□□□□ -1.1
RIPK4P57078 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 AC009879.1-201ENST00000520029 839 ntBASIC8.19□□□□□ -1.1
RIPK4P57078 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.19□□□□□ -1.1
RIPK4P57078 AC006512.2-201ENST00000543250 486 ntBASIC8.19□□□□□ -1.1
RIPK4P57078 AC092865.1-201ENST00000544395 1023 ntBASIC8.19□□□□□ -1.1
RIPK4P57078 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.19□□□□□ -1.1
RIPK4P57078 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.19□□□□□ -1.1
RIPK4P57078 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.19□□□□□ -1.1
RIPK4P57078 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RIPK4P57078 MIR3189-201ENST00000578735 73 ntBASIC8.19□□□□□ -1.1
RIPK4P57078 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.19□□□□□ -1.1
RIPK4P57078 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.19□□□□□ -1.1
RIPK4P57078 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.19□□□□□ -1.1
RIPK4P57078 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.19□□□□□ -1.1
RIPK4P57078 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
RIPK4P57078 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.19□□□□□ -1.1
RIPK4P57078 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RIPK4P57078 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
RIPK4P57078 AP001541.1-201ENST00000623322 1904 ntBASIC8.19□□□□□ -1.1
RIPK4P57078 OFD1P17-201ENST00000437639 3018 ntBASIC8.19□□□□□ -1.1
RIPK4P57078 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
RIPK4P57078 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.18□□□□□ -1.1
RIPK4P57078 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 AC027575.3-201ENST00000583058 2747 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
RIPK4P57078 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.18□□□□□ -1.1
RIPK4P57078 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RIPK4P57078 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RIPK4P57078 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.18□□□□□ -1.1
RIPK4P57078 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC8.18□□□□□ -1.1
RIPK4P57078 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
RIPK4P57078 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
RIPK4P57078 VN1R12P-201ENST00000403778 876 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 RN7SKP144-201ENST00000411108 279 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 AC007679.3-201ENST00000434035 414 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.18□□□□□ -1.1
RIPK4P57078 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.18□□□□□ -1.1
RIPK4P57078 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.18□□□□□ -1.1
RIPK4P57078 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.18□□□□□ -1.1
RIPK4P57078 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.18□□□□□ -1.1
RIPK4P57078 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC8.18□□□□□ -1.1
RIPK4P57078 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 MIR4271-201ENST00000582451 67 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 AP001823.1-201ENST00000604056 1003 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 AC091193.1-201ENST00000604640 448 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 AL352984.2-201ENST00000611153 546 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.18□□□□□ -1.1
RIPK4P57078 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC8.18□□□□□ -1.1
RIPK4P57078 AL161901.1-201ENST00000624954 3425 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
RIPK4P57078 AC011369.2-201ENST00000624423 1567 ntBASIC8.18□□□□□ -1.1
RIPK4P57078 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.17□□□□□ -1.1
RIPK4P57078 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
RIPK4P57078 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
RIPK4P57078 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
RIPK4P57078 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.17□□□□□ -1.1
RIPK4P57078 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms