Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC114477.1-201ENST00000605097 605 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AC092944.2-201ENST00000605443 889 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN20P56880 AL354696.1-201ENST00000614652 497 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 AC005277.2-201ENST00000617898 390 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 MIR7854-201ENST00000620068 65 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 MIR6823-201ENST00000622118 61 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.94□□□□□ -1.46
CLDN20P56880 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLDN20P56880 AC007012.2-201ENST00000623206 1676 ntBASIC5.94□□□□□ -1.46
CLDN20P56880 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLDN20P56880 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLDN20P56880 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC023245.2-201ENST00000530760 2978 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 OR5T3-201ENST00000303059 1023 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 FAM32BP-201ENST00000344033 333 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 SNORA64.3-201ENST00000365647 134 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CLDN20P56880 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 RN7SKP146-201ENST00000410242 334 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN20P56880 RSL24D1P8-201ENST00000434442 492 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC013403.1-201ENST00000436954 263 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.93□□□□□ -1.46
CLDN20P56880 RAD1P2-201ENST00000446414 663 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN20P56880 YRDCP3-201ENST00000456507 480 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 AC044810.1-201ENST00000480271 711 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 RN7SL413P-201ENST00000482700 297 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC092349.1-201ENST00000504903 310 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC008429.2-201ENST00000523057 864 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.93□□□□□ -1.46
CLDN20P56880 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 AC092718.4-201ENST00000566639 716 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 MIR3908-201ENST00000579798 126 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 AL137246.2-201ENST00000613439 662 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.93□□□□□ -1.46
CLDN20P56880 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.93□□□□□ -1.46
CLDN20P56880 SAMMSON-210ENST00000641260 1308 ntBASIC5.93□□□□□ -1.46
CLDN20P56880 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.93□□□□□ -1.46
CLDN20P56880 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLDN20P56880 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN20P56880 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN20P56880 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.92□□□□□ -1.46
CLDN20P56880 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN20P56880 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CLDN20P56880 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.92□□□□□ -1.46
CLDN20P56880 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 MTND2P12-201ENST00000417560 1252 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 OR6R1P-201ENST00000431838 940 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.92□□□□□ -1.46
CLDN20P56880 XKRYP6-201ENST00000440468 1116 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 XKRYP3-201ENST00000442113 1116 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 RPS18P1-201ENST00000447840 458 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 RPL23AP68-201ENST00000480924 445 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 RPL9P15-201ENST00000491096 532 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CLDN20P56880 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN20P56880 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN20P56880 AC023389.2-201ENST00000580031 955 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.92□□□□□ -1.46
CLDN20P56880 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN20P56880 AL356986.1-201ENST00000604085 341 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 AL713998.2-201ENST00000604538 1198 ntBASIC5.92□□□□□ -1.46
CLDN20P56880 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms