Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RN7SL714P-201ENST00000487050 298 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 RN7SL104P-201ENST00000498686 293 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 KHDC1P1-201ENST00000511053 508 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 AC106800.3-201ENST00000511389 308 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.71□□□□□ -1.5
CLDN18P56856 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 MIR4271-201ENST00000582451 67 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN18P56856 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 RPSAP75-201ENST00000605848 301 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.71□□□□□ -1.5
CLDN18P56856 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLDN18P56856 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN18P56856 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CLDN18P56856 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
CLDN18P56856 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN18P56856 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN18P56856 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN18P56856 TTC41P-205ENST00000551270 3963 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN18P56856 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLDN18P56856 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CLDN18P56856 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN18P56856 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
CLDN18P56856 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CLDN18P56856 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN18P56856 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 RNA5SP350-201ENST00000363298 111 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 OOSP1-201ENST00000398992 1270 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 U3.43-201ENST00000410734 213 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 AC092865.3-201ENST00000425390 1026 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN18P56856 RPSAP40-201ENST00000442343 891 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN18P56856 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLDN18P56856 RN7SL170P-201ENST00000487098 295 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 OR4D12P-201ENST00000509361 911 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 SNX18P25-201ENST00000510539 758 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 HSD3BP3-201ENST00000514706 994 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 NPIPB14P-203ENST00000532298 987 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 AL121579.2-201ENST00000555466 590 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CLDN18P56856 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.7□□□□□ -1.5
CLDN18P56856 CYCSP1-201ENST00000604815 315 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN18P56856 AL008723.3-201ENST00000608926 449 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 AC073593.1-201ENST00000624500 411 ntBASIC5.7□□□□□ -1.5
CLDN18P56856 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CLDN18P56856 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN18P56856 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN18P56856 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CLDN18P56856 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN18P56856 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN18P56856 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
CLDN18P56856 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN18P56856 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN18P56856 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN18P56856 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CLDN18P56856 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN18P56856 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN18P56856 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.69□□□□□ -1.5
CLDN18P56856 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN18P56856 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN18P56856 RN7SKP237-201ENST00000364663 301 ntBASIC5.69□□□□□ -1.5
CLDN18P56856 CXADRP1-201ENST00000398098 1095 ntBASIC5.69□□□□□ -1.5
CLDN18P56856 VN1R12P-201ENST00000403778 876 ntBASIC5.69□□□□□ -1.5
CLDN18P56856 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLDN18P56856 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLDN18P56856 RPSAP65-201ENST00000429660 595 ntBASIC5.69□□□□□ -1.5
CLDN18P56856 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.69□□□□□ -1.5
CLDN18P56856 AL645936.1-201ENST00000441979 518 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms