Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AC106052.1-201ENST00000608029 497 ntBASIC8.16□□□□□ -1.1
TNNI2P48788 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.16□□□□□ -1.1
TNNI2P48788 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.16□□□□□ -1.1
TNNI2P48788 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC8.16□□□□□ -1.1
TNNI2P48788 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.16□□□□□ -1.1
TNNI2P48788 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC8.16□□□□□ -1.1
TNNI2P48788 AP003399.1-201ENST00000637534 361 ntBASIC8.16□□□□□ -1.1
TNNI2P48788 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.16□□□□□ -1.1
TNNI2P48788 CASC19-232ENST00000641480 1244 ntBASIC8.16□□□□□ -1.1
TNNI2P48788 CASC19-274ENST00000642018 970 ntBASIC8.16□□□□□ -1.1
TNNI2P48788 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TNNI2P48788 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TNNI2P48788 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
TNNI2P48788 SPATA31C2-201ENST00000324915 3777 ntBASIC8.16□□□□□ -1.1
TNNI2P48788 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.16□□□□□ -1.1
TNNI2P48788 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TNNI2P48788 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.15□□□□□ -1.1
TNNI2P48788 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.15□□□□□ -1.1
TNNI2P48788 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.15□□□□□ -1.1
TNNI2P48788 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 RBBP4P4-201ENST00000398588 1289 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.15□□□□□ -1.1
TNNI2P48788 RN7SKP188-201ENST00000410789 317 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 GPN3P1-201ENST00000423883 535 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.15□□□□□ -1.1
TNNI2P48788 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.15□□□□□ -1.1
TNNI2P48788 AC046176.1-201ENST00000435260 1170 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.15□□□□□ -1.1
TNNI2P48788 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 AC131233.1-201ENST00000479200 955 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 RN7SL413P-201ENST00000482700 297 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 HMGB1P3-201ENST00000502802 616 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 AC010627.1-201ENST00000503819 1294 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 PRELID3BP6-201ENST00000503839 571 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC8.15□□□□□ -1.1
TNNI2P48788 MTCO1P31-201ENST00000506355 492 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
TNNI2P48788 HMGN1P17-201ENST00000513734 295 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.15□□□□□ -1.1
TNNI2P48788 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.15□□□□□ -1.1
TNNI2P48788 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.15□□□□□ -1.1
TNNI2P48788 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC8.15□□□□□ -1.1
TNNI2P48788 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
TNNI2P48788 AC016180.1-201ENST00000567945 403 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.15□□□□□ -1.1
TNNI2P48788 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.15□□□□□ -1.1
TNNI2P48788 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 MIR6778-201ENST00000617912 73 ntBASIC8.15□□□□□ -1.1
TNNI2P48788 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC8.15□□□□□ -1.1
TNNI2P48788 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.15□□□□□ -1.1
TNNI2P48788 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TNNI2P48788 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TNNI2P48788 AL359715.3-201ENST00000569267 2123 ntBASIC8.15□□□□□ -1.11
TNNI2P48788 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.15□□□□□ -1.11
TNNI2P48788 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
TNNI2P48788 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
TNNI2P48788 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
TNNI2P48788 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.15□□□□□ -1.11
TNNI2P48788 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
TNNI2P48788 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.15□□□□□ -1.11
TNNI2P48788 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
TNNI2P48788 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.14□□□□□ -1.11
TNNI2P48788 NAMPTP1-201ENST00000440465 2514 ntBASIC8.14□□□□□ -1.11
TNNI2P48788 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
TNNI2P48788 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.14□□□□□ -1.11
TNNI2P48788 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.14□□□□□ -1.11
TNNI2P48788 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
TNNI2P48788 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TNNI2P48788 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 AC123769.2-201ENST00000624332 5984 ntBASIC8.14□□□□□ -1.11
TNNI2P48788 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.14□□□□□ -1.11
TNNI2P48788 AL590635.1-201ENST00000406314 586 ntBASIC8.14□□□□□ -1.11
TNNI2P48788 MIR1275-201ENST00000408770 80 ntBASIC8.14□□□□□ -1.11
TNNI2P48788 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.14□□□□□ -1.11
TNNI2P48788 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC8.14□□□□□ -1.11
TNNI2P48788 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC8.14□□□□□ -1.11
TNNI2P48788 AC013262.1-201ENST00000426710 252 ntBASIC8.14□□□□□ -1.11
TNNI2P48788 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC8.14□□□□□ -1.11
TNNI2P48788 AC007563.3-201ENST00000433233 371 ntBASIC8.14□□□□□ -1.11
TNNI2P48788 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TNNI2P48788 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC8.14□□□□□ -1.11
TNNI2P48788 RPL7P33-201ENST00000444159 742 ntBASIC8.14□□□□□ -1.11
TNNI2P48788 AC097359.1-201ENST00000447946 463 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms