Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.53□□□□□ -1.36
HTTP42858 MIR541-201ENST00000401360 84 ntBASIC6.53□□□□□ -1.36
HTTP42858 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.53□□□□□ -1.36
HTTP42858 AL133173.1-201ENST00000423458 397 ntBASIC6.53□□□□□ -1.36
HTTP42858 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.53□□□□□ -1.36
HTTP42858 RPL7P39-201ENST00000481157 744 ntBASIC6.53□□□□□ -1.36
HTTP42858 AL049872.1-201ENST00000556323 322 ntBASIC6.53□□□□□ -1.36
HTTP42858 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.53□□□□□ -1.36
HTTP42858 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC6.53□□□□□ -1.36
HTTP42858 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HTTP42858 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HTTP42858 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.53□□□□□ -1.36
HTTP42858 RPL5P22-201ENST00000480199 884 ntBASIC6.53□□□□□ -1.36
HTTP42858 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.53□□□□□ -1.36
HTTP42858 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.53□□□□□ -1.36
HTTP42858 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.53□□□□□ -1.36
HTTP42858 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.53□□□□□ -1.36
HTTP42858 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.53□□□□□ -1.36
HTTP42858 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HTTP42858 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 AC023824.7-201ENST00000623041 5731 ntBASIC6.53□□□□□ -1.36
HTTP42858 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.53□□□□□ -1.36
HTTP42858 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HTTP42858 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
HTTP42858 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
HTTP42858 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC6.52□□□□□ -1.37
HTTP42858 RPL23P2-201ENST00000320371 421 ntBASIC6.52□□□□□ -1.37
HTTP42858 AL713922.1-201ENST00000416477 747 ntBASIC6.52□□□□□ -1.37
HTTP42858 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.52□□□□□ -1.37
HTTP42858 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 LDHBP2-201ENST00000456969 1005 ntBASIC6.52□□□□□ -1.37
HTTP42858 RPL32P33-201ENST00000487023 394 ntBASIC6.52□□□□□ -1.37
HTTP42858 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.52□□□□□ -1.37
HTTP42858 GARSP1-201ENST00000570895 719 ntBASIC6.52□□□□□ -1.37
HTTP42858 AL390318.1-201ENST00000624564 687 ntBASIC6.52□□□□□ -1.37
HTTP42858 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.52□□□□□ -1.37
HTTP42858 HS6ST3-202ENST00000620595 7073 ntBASIC6.52□□□□□ -1.37
HTTP42858 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 AC079753.1-201ENST00000623243 3868 ntBASIC6.52□□□□□ -1.37
HTTP42858 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HTTP42858 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.52□□□□□ -1.37
HTTP42858 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
HTTP42858 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.52□□□□□ -1.37
HTTP42858 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.52□□□□□ -1.37
HTTP42858 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 FTH1P20-201ENST00000434913 548 ntBASIC6.52□□□□□ -1.37
HTTP42858 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.52□□□□□ -1.37
HTTP42858 FRG2FP-204ENST00000453982 852 ntBASIC6.52□□□□□ -1.37
HTTP42858 AC008897.1-201ENST00000494006 347 ntBASIC6.52□□□□□ -1.37
HTTP42858 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.52□□□□□ -1.37
HTTP42858 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 AC011840.5-201ENST00000582125 771 ntBASIC6.52□□□□□ -1.37
HTTP42858 AP000346.3-201ENST00000622821 210 ntBASIC6.52□□□□□ -1.37
HTTP42858 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HTTP42858 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.52□□□□□ -1.37
HTTP42858 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 U3.36-201ENST00000408418 213 ntBASIC6.52□□□□□ -1.37
HTTP42858 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 AC006335.2-201ENST00000437993 330 ntBASIC6.52□□□□□ -1.37
HTTP42858 CEACAMP7-201ENST00000444105 496 ntBASIC6.52□□□□□ -1.37
HTTP42858 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HTTP42858 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HTTP42858 AC083982.1-201ENST00000485679 344 ntBASIC6.52□□□□□ -1.37
HTTP42858 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.52□□□□□ -1.37
HTTP42858 AC090638.1-201ENST00000498296 909 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms