Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.3□□□□□ -1.4
RPA3P35244 AL359955.1-201ENST00000455242 3275 ntBASIC6.3□□□□□ -1.4
RPA3P35244 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 AC217777.1-201ENST00000570034 1471 ntBASIC6.3□□□□□ -1.4
RPA3P35244 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.3□□□□□ -1.4
RPA3P35244 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RPA3P35244 RN7SKP184-201ENST00000362348 333 ntBASIC6.3□□□□□ -1.4
RPA3P35244 AL391419.1-201ENST00000398901 1275 ntBASIC6.3□□□□□ -1.4
RPA3P35244 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 GAPDHP19-201ENST00000431768 1005 ntBASIC6.3□□□□□ -1.4
RPA3P35244 AL390879.1-201ENST00000439143 386 ntBASIC6.3□□□□□ -1.4
RPA3P35244 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.3□□□□□ -1.4
RPA3P35244 VPS25P1-201ENST00000455691 508 ntBASIC6.3□□□□□ -1.4
RPA3P35244 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
RPA3P35244 OR9A1P-202ENST00000484361 945 ntBASIC6.3□□□□□ -1.4
RPA3P35244 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RPA3P35244 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.3□□□□□ -1.4
RPA3P35244 AC037479.1-201ENST00000558361 625 ntBASIC6.3□□□□□ -1.4
RPA3P35244 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.3□□□□□ -1.4
RPA3P35244 MIR212-201ENST00000586026 110 ntBASIC6.3□□□□□ -1.4
RPA3P35244 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.3□□□□□ -1.4
RPA3P35244 AC019257.2-201ENST00000605539 497 ntBASIC6.3□□□□□ -1.4
RPA3P35244 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 MIR6085-201ENST00000618314 110 ntBASIC6.3□□□□□ -1.4
RPA3P35244 AC069234.4-201ENST00000621276 412 ntBASIC6.3□□□□□ -1.4
RPA3P35244 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RPA3P35244 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.3□□□□□ -1.4
RPA3P35244 HDAC1P2-201ENST00000453661 1398 ntBASIC6.3□□□□□ -1.4
RPA3P35244 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RPA3P35244 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RPA3P35244 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
RPA3P35244 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RPA3P35244 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 CCNT2P1-201ENST00000423082 1315 ntBASIC6.29□□□□□ -1.4
RPA3P35244 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 RN7SKP221-201ENST00000410420 301 ntBASIC6.29□□□□□ -1.4
RPA3P35244 GPN3P1-201ENST00000423883 535 ntBASIC6.29□□□□□ -1.4
RPA3P35244 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.29□□□□□ -1.4
RPA3P35244 MED28P4-201ENST00000433137 572 ntBASIC6.29□□□□□ -1.4
RPA3P35244 AL020997.1-201ENST00000446554 349 ntBASIC6.29□□□□□ -1.4
RPA3P35244 RPS18P1-201ENST00000447840 458 ntBASIC6.29□□□□□ -1.4
RPA3P35244 CEACAMP11-201ENST00000455211 583 ntBASIC6.29□□□□□ -1.4
RPA3P35244 RNA5SP400-201ENST00000517155 111 ntBASIC6.29□□□□□ -1.4
RPA3P35244 IGKV2-19-201ENST00000518132 283 ntBASIC6.29□□□□□ -1.4
RPA3P35244 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.29□□□□□ -1.4
RPA3P35244 RPL3P13-201ENST00000550415 216 ntBASIC6.29□□□□□ -1.4
RPA3P35244 AC103968.1-201ENST00000557841 573 ntBASIC6.29□□□□□ -1.4
RPA3P35244 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.29□□□□□ -1.4
RPA3P35244 AC005702.3-201ENST00000585345 1447 ntBASIC6.29□□□□□ -1.4
RPA3P35244 AC005479.3-201ENST00000602790 431 ntBASIC6.29□□□□□ -1.4
RPA3P35244 AC004805.3-201ENST00000603178 310 ntBASIC6.29□□□□□ -1.4
RPA3P35244 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.29□□□□□ -1.4
RPA3P35244 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.29□□□□□ -1.4
RPA3P35244 AL589743.6-201ENST00000611025 117 ntBASIC6.29□□□□□ -1.4
RPA3P35244 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.29□□□□□ -1.4
RPA3P35244 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.29□□□□□ -1.4
RPA3P35244 AC003992.1-201ENST00000635364 557 ntBASIC6.29□□□□□ -1.4
RPA3P35244 AC007603.3-201ENST00000636915 979 ntBASIC6.29□□□□□ -1.4
RPA3P35244 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.29□□□□□ -1.4
RPA3P35244 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
RPA3P35244 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.29□□□□□ -1.4
RPA3P35244 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
RPA3P35244 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
RPA3P35244 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RPA3P35244 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RPA3P35244 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RPA3P35244 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms