Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.14□□□□□ -1.27
CIITAP33076 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.14□□□□□ -1.27
CIITAP33076 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 AL157831.2-201ENST00000564681 3095 ntBASIC7.14□□□□□ -1.27
CIITAP33076 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.14□□□□□ -1.27
CIITAP33076 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
CIITAP33076 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CIITAP33076 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.13□□□□□ -1.27
CIITAP33076 AL133243.2-201ENST00000610331 1621 ntBASIC7.13□□□□□ -1.27
CIITAP33076 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 AC022507.1-201ENST00000548349 1505 ntBASIC7.13□□□□□ -1.27
CIITAP33076 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.13□□□□□ -1.27
CIITAP33076 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 RNA5SP346-201ENST00000363541 121 ntBASIC7.13□□□□□ -1.27
CIITAP33076 RNA5SP279-201ENST00000365513 117 ntBASIC7.13□□□□□ -1.27
CIITAP33076 RNU2-18P-201ENST00000411224 162 ntBASIC7.13□□□□□ -1.27
CIITAP33076 RFESDP1-201ENST00000422350 461 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AC092865.3-201ENST00000425390 1026 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 AC108479.1-201ENST00000431142 427 ntBASIC7.13□□□□□ -1.27
CIITAP33076 OR6C71P-201ENST00000432580 913 ntBASIC7.13□□□□□ -1.27
CIITAP33076 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 AL645936.1-201ENST00000441979 518 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AC009237.1-201ENST00000442127 744 ntBASIC7.13□□□□□ -1.27
CIITAP33076 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 MTND4LP12-201ENST00000448237 295 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AC092967.1-201ENST00000449016 481 ntBASIC7.13□□□□□ -1.27
CIITAP33076 RN7SL649P-201ENST00000496974 275 ntBASIC7.13□□□□□ -1.27
CIITAP33076 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 RNA5SP441-201ENST00000516809 88 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AP001858.2-201ENST00000536213 601 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.13□□□□□ -1.27
CIITAP33076 CYCSP1-201ENST00000604815 315 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AL591167.1-201ENST00000607321 456 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AL683826.1-201ENST00000624104 627 ntBASIC7.13□□□□□ -1.27
CIITAP33076 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 AC092646.2-201ENST00000431242 2095 ntBASIC7.13□□□□□ -1.27
CIITAP33076 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
CIITAP33076 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CIITAP33076 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CIITAP33076 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CIITAP33076 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.12□□□□□ -1.27
CIITAP33076 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.12□□□□□ -1.27
CIITAP33076 AC112243.1-201ENST00000623949 3851 ntBASIC7.12□□□□□ -1.27
CIITAP33076 BIN2P1-201ENST00000504996 1530 ntBASIC7.12□□□□□ -1.27
CIITAP33076 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.12□□□□□ -1.27
CIITAP33076 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CIITAP33076 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.12□□□□□ -1.27
CIITAP33076 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 AC006213.6-201ENST00000623722 4179 ntBASIC7.12□□□□□ -1.27
CIITAP33076 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CIITAP33076 RNA5SP232-201ENST00000364144 119 ntBASIC7.12□□□□□ -1.27
CIITAP33076 RN7SKP187-201ENST00000365536 330 ntBASIC7.12□□□□□ -1.27
CIITAP33076 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.12□□□□□ -1.27
CIITAP33076 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CIITAP33076 UBE2V1P14-201ENST00000415815 558 ntBASIC7.12□□□□□ -1.27
CIITAP33076 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.12□□□□□ -1.27
CIITAP33076 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.12□□□□□ -1.27
CIITAP33076 AC093166.3-201ENST00000448785 303 ntBASIC7.12□□□□□ -1.27
CIITAP33076 AC104339.1-201ENST00000465478 348 ntBASIC7.12□□□□□ -1.27
CIITAP33076 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.12□□□□□ -1.27
CIITAP33076 HSD3BP3-201ENST00000514706 994 ntBASIC7.12□□□□□ -1.27
CIITAP33076 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.12□□□□□ -1.27
CIITAP33076 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.12□□□□□ -1.27
CIITAP33076 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.12□□□□□ -1.27
CIITAP33076 AC002519.2-203ENST00000567043 837 ntBASIC7.12□□□□□ -1.27
CIITAP33076 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.12□□□□□ -1.27
CIITAP33076 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.12□□□□□ -1.27
CIITAP33076 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.12□□□□□ -1.27
CIITAP33076 AL357140.4-201ENST00000636827 412 ntBASIC7.12□□□□□ -1.27
CIITAP33076 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.12□□□□□ -1.27
CIITAP33076 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
CIITAP33076 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms