Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 MIR3157-201ENST00000578688 85 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.06□□□□□ -1.44
PTPN6P29350 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN6P29350 AL008582.1-201ENST00000609612 442 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 AL162377.2-201ENST00000624532 337 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 AC007603.3-201ENST00000636915 979 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 MTCO1P46-201ENST00000451639 1491 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 NCOA4P2-201ENST00000340589 1813 ntBASIC6.06□□□□□ -1.44
PTPN6P29350 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PTPN6P29350 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN6P29350 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN6P29350 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PTPN6P29350 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN6P29350 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTPN6P29350 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN6P29350 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN6P29350 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN6P29350 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.05□□□□□ -1.44
PTPN6P29350 AC217777.1-201ENST00000570034 1471 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN6P29350 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTPN6P29350 MRPS6P2-201ENST00000381143 370 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 HMGA1P8-201ENST00000414130 321 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN6P29350 GAPDHP19-201ENST00000431768 1005 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC092106.2-201ENST00000436597 487 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 H3F3BP1-201ENST00000440551 403 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN6P29350 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN6P29350 OR52I1-201ENST00000450052 1050 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 KF459542.1-201ENST00000450908 553 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN6P29350 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN6P29350 RN7SL221P-201ENST00000466190 281 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 RN7SL836P-201ENST00000476140 296 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
PTPN6P29350 AC022206.1-201ENST00000495947 347 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC092349.1-201ENST00000504903 310 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.05□□□□□ -1.44
PTPN6P29350 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.05□□□□□ -1.44
PTPN6P29350 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN6P29350 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN6P29350 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN6P29350 OR4H6P-201ENST00000563771 921 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.05□□□□□ -1.44
PTPN6P29350 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN6P29350 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN6P29350 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN6P29350 MIR4732-201ENST00000581873 76 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC090616.1-201ENST00000583895 447 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN6P29350 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.05□□□□□ -1.44
PTPN6P29350 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN6P29350 AL008723.3-201ENST00000608926 449 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC015819.1-201ENST00000613588 663 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 U1.41-201ENST00000617626 165 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC241377.1-201ENST00000619797 406 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN6P29350 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN6P29350 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.05□□□□□ -1.44
PTPN6P29350 AOX3P-204ENST00000491025 2107 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC116158.1-201ENST00000560231 2129 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN6P29350 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTPN6P29350 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN6P29350 AC140479.2-201ENST00000421567 3130 ntBASIC6.05□□□□□ -1.44
PTPN6P29350 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
PTPN6P29350 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PTPN6P29350 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.05□□□□□ -1.44
PTPN6P29350 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
PTPN6P29350 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
PTPN6P29350 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN6P29350 AC027279.4-201ENST00000624371 2072 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN6P29350 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 U3.52-201ENST00000384034 216 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 AL391419.1-201ENST00000398901 1275 ntBASIC6.04□□□□□ -1.44
PTPN6P29350 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN6P29350 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms