Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCD3P28288 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCD3P28288 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCD3P28288 AC245052.7-201ENST00000601161 359 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 AL049840.5-201ENST00000602827 552 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 AC067838.1-201ENST00000606064 577 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 AL023583.1-201ENST00000607518 1143 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 AC093635.1-201ENST00000609028 555 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.12□□□□□ -1.43
ABCD3P28288 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 LINC00216-201ENST00000623548 1126 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
ABCD3P28288 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.11□□□□□ -1.43
ABCD3P28288 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.11□□□□□ -1.43
ABCD3P28288 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
ABCD3P28288 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 AC007012.2-201ENST00000623206 1676 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 MTND4P21-201ENST00000453886 1357 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 FUNDC2P3-201ENST00000334716 533 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ABCD3P28288 RNU4-39P-201ENST00000362455 127 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 RPL12P23-201ENST00000405880 490 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.11□□□□□ -1.43
ABCD3P28288 RNU4-64P-201ENST00000410795 131 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 AL713922.1-201ENST00000416477 747 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.11□□□□□ -1.43
ABCD3P28288 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.11□□□□□ -1.43
ABCD3P28288 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.11□□□□□ -1.43
ABCD3P28288 MTCO3P43-201ENST00000440974 771 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.11□□□□□ -1.43
ABCD3P28288 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.11□□□□□ -1.43
ABCD3P28288 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.11□□□□□ -1.43
ABCD3P28288 SUMO2P4-201ENST00000504193 276 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.11□□□□□ -1.43
ABCD3P28288 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.11□□□□□ -1.43
ABCD3P28288 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 OR8K2P-201ENST00000524645 927 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 OR9G2P-201ENST00000533326 880 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.11□□□□□ -1.43
ABCD3P28288 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 SNORD96A-201ENST00000606577 79 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 MIR6885-201ENST00000612241 66 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 AC005277.2-201ENST00000617898 390 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 AC074276.2-201ENST00000619891 348 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 AC211486.4-201ENST00000621495 113 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 AC020923.1-201ENST00000624021 917 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 AC018692.2-201ENST00000624130 348 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 AL356094.1-201ENST00000624663 1212 ntBASIC6.11□□□□□ -1.43
ABCD3P28288 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.11□□□□□ -1.43
ABCD3P28288 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ABCD3P28288 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ABCD3P28288 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.11□□□□□ -1.43
ABCD3P28288 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
ABCD3P28288 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ABCD3P28288 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ABCD3P28288 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ABCD3P28288 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.1□□□□□ -1.43
ABCD3P28288 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ABCD3P28288 AL139384.2-201ENST00000613809 3590 ntBASIC6.1□□□□□ -1.43
ABCD3P28288 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ABCD3P28288 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ABCD3P28288 OR7A2P-201ENST00000304105 930 ntBASIC6.1□□□□□ -1.43
ABCD3P28288 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms