Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC7.28□□□□□ -1.24
POLR2AP24928 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
POLR2AP24928 WDR95P-201ENST00000425638 1542 ntBASIC7.28□□□□□ -1.24
POLR2AP24928 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
POLR2AP24928 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
POLR2AP24928 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
POLR2AP24928 DUTP4-201ENST00000424782 475 ntBASIC7.28□□□□□ -1.24
POLR2AP24928 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.28□□□□□ -1.24
POLR2AP24928 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.28□□□□□ -1.24
POLR2AP24928 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC7.28□□□□□ -1.24
POLR2AP24928 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
POLR2AP24928 DPPA2P4-201ENST00000563717 878 ntBASIC7.28□□□□□ -1.24
POLR2AP24928 FAM27E4-201ENST00000605259 342 ntBASIC7.28□□□□□ -1.24
POLR2AP24928 AL590396.2-201ENST00000636511 1041 ntBASIC7.28□□□□□ -1.24
POLR2AP24928 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
POLR2AP24928 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
POLR2AP24928 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
POLR2AP24928 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.27□□□□□ -1.24
POLR2AP24928 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
POLR2AP24928 AC119674.1-204ENST00000641348 1343 ntBASIC7.27□□□□□ -1.24
POLR2AP24928 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.24
POLR2AP24928 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
POLR2AP24928 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
POLR2AP24928 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
POLR2AP24928 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.27□□□□□ -1.25
POLR2AP24928 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
POLR2AP24928 AL132875.1-201ENST00000403623 949 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 RPL35AP24-201ENST00000413846 330 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.27□□□□□ -1.25
POLR2AP24928 AC008753.1-201ENST00000423096 284 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.27□□□□□ -1.25
POLR2AP24928 AC002486.2-201ENST00000447806 590 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 NPM1P27-201ENST00000502784 830 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 MTND1P6-201ENST00000523621 946 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.27□□□□□ -1.25
POLR2AP24928 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.27□□□□□ -1.25
POLR2AP24928 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.27□□□□□ -1.25
POLR2AP24928 AC079395.2-201ENST00000610982 737 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 AC048344.4-201ENST00000619744 527 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 AL357562.1-201ENST00000624911 609 ntBASIC7.27□□□□□ -1.25
POLR2AP24928 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.25
POLR2AP24928 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
POLR2AP24928 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.27□□□□□ -1.25
POLR2AP24928 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
POLR2AP24928 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
POLR2AP24928 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.27□□□□□ -1.25
POLR2AP24928 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
POLR2AP24928 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.27□□□□□ -1.25
POLR2AP24928 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
POLR2AP24928 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 MIR585-201ENST00000384887 94 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 HMGB1P20-201ENST00000402555 677 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 SPTLC1P2-201ENST00000407089 121 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 KIF4CP-201ENST00000422742 1279 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 AC073310.1-201ENST00000423226 1033 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.26□□□□□ -1.25
POLR2AP24928 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.26□□□□□ -1.25
POLR2AP24928 RN7SL727P-201ENST00000482164 296 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.26□□□□□ -1.25
POLR2AP24928 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.26□□□□□ -1.25
POLR2AP24928 SNORA70.20-201ENST00000516848 126 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 HAUS8P1-201ENST00000549005 542 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 AC009712.1-201ENST00000564938 316 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.26□□□□□ -1.25
POLR2AP24928 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.26□□□□□ -1.25
POLR2AP24928 CLIC4P2-201ENST00000601934 717 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 AL354696.1-201ENST00000614652 497 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 AL445670.1-201ENST00000618889 801 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 AL132640.3-201ENST00000630473 177 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 MAPK10-261ENST00000641050 3109 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.26□□□□□ -1.25
POLR2AP24928 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
POLR2AP24928 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.26□□□□□ -1.25
POLR2AP24928 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
POLR2AP24928 OR11H13P-201ENST00000359695 979 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 MIR375-201ENST00000362103 64 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.26□□□□□ -1.25
POLR2AP24928 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.26□□□□□ -1.25
POLR2AP24928 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.26□□□□□ -1.25
POLR2AP24928 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.26□□□□□ -1.25
POLR2AP24928 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.26□□□□□ -1.25
POLR2AP24928 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
POLR2AP24928 IGLV3-6-201ENST00000523937 250 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.26□□□□□ -1.25
POLR2AP24928 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.26□□□□□ -1.25
POLR2AP24928 AC091078.2-201ENST00000557145 559 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 MIR3189-201ENST00000578735 73 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 MIR4505-201ENST00000582238 73 ntBASIC7.26□□□□□ -1.25
POLR2AP24928 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms