Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
PTPRAP18433 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
PTPRAP18433 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 TTC3P1-201ENST00000399586 6081 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 MFSD8-218ENST00000641186 4448 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPRAP18433 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRAP18433 AC104454.1-201ENST00000421341 1401 ntBASIC8.12□□□□□ -1.11
PTPRAP18433 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 AL353763.1-201ENST00000624467 1628 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
PTPRAP18433 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRAP18433 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 AL512329.1-201ENST00000404600 1592 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRAP18433 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC092646.2-201ENST00000431242 2095 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
PTPRAP18433 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC8.11□□□□□ -1.11
PTPRAP18433 RNU4-22P-201ENST00000411058 166 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC8.11□□□□□ -1.11
PTPRAP18433 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRAP18433 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.11□□□□□ -1.11
PTPRAP18433 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 GAPDHP37-201ENST00000442317 968 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 EEF1B2P5-201ENST00000444820 548 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AC234771.2-201ENST00000445718 597 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 PRDX1P1-201ENST00000449329 596 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 NMNAT1P3-201ENST00000457517 888 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.11□□□□□ -1.11
PTPRAP18433 MTCO3P7-201ENST00000510008 774 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.11□□□□□ -1.11
PTPRAP18433 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.11□□□□□ -1.11
PTPRAP18433 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC092865.1-201ENST00000544395 1023 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC005242.1-201ENST00000585658 438 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 OR2AS2P-201ENST00000606902 342 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 AL096803.3-201ENST00000609032 532 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AP005329.3-201ENST00000609924 686 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC8.11□□□□□ -1.11
PTPRAP18433 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRAP18433 uc_338.29-201ENST00000615099 168 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AL603755.1-201ENST00000619504 163 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AL591926.1-201ENST00000620542 217 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 MIR6806-201ENST00000622141 64 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AL157770.1-201ENST00000623049 439 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AL359715.5-201ENST00000623431 443 ntBASIC8.11□□□□□ -1.11
PTPRAP18433 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PTPRAP18433 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRAP18433 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRAP18433 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
PTPRAP18433 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.11□□□□□ -1.11
PTPRAP18433 SAMMSON-222ENST00000641901 2727 ntBASIC8.1□□□□□ -1.11
PTPRAP18433 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 AC104446.1-201ENST00000613728 1321 ntBASIC8.1□□□□□ -1.11
PTPRAP18433 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPRAP18433 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPRAP18433 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPRAP18433 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRAP18433 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPRAP18433 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPRAP18433 RNU6-207P-201ENST00000384137 107 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms