Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC073869.7-201ENST00000640874 297 ntBASIC8.73□□□□□ -1.01
ALDH1A1P00352 AC016831.3-201ENST00000446451 1723 ntBASIC8.73□□□□□ -1.01
ALDH1A1P00352 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ALDH1A1P00352 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
ALDH1A1P00352 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ALDH1A1P00352 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ALDH1A1P00352 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.73□□□□□ -1.01
ALDH1A1P00352 CCDC150P1-201ENST00000537123 2215 ntBASIC8.73□□□□□ -1.01
ALDH1A1P00352 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ALDH1A1P00352 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ALDH1A1P00352 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
ALDH1A1P00352 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
ALDH1A1P00352 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 THAP12P8-201ENST00000447914 2115 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 CBX3P1-201ENST00000325243 554 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 RNU4-21P-201ENST00000362802 126 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 SSX9-201ENST00000376909 591 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 SSX6-201ENST00000376932 562 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 Y_RNA.509-201ENST00000384506 99 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 Y_RNA.554-201ENST00000384672 102 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 MIR323B-201ENST00000385269 82 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 VN1R12P-201ENST00000403778 876 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AL033519.1-201ENST00000407266 307 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 AL355862.1-201ENST00000412705 353 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 HMGN1P32-201ENST00000441744 256 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 PSPC1P1-201ENST00000442352 665 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 RPL5P10-201ENST00000445207 894 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC005517.1-201ENST00000452091 489 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 ST13P21-201ENST00000453250 1098 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 RN7SL372P-201ENST00000461982 298 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC026348.1-201ENST00000462549 1053 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 RN7SL868P-201ENST00000485915 303 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 RN7SL655P-201ENST00000486087 298 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC091951.2-201ENST00000500762 203 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 GAPDHP61-201ENST00000507324 1005 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 MTND3P22-201ENST00000510932 243 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 RNU6-506P-201ENST00000516553 94 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC023310.2-201ENST00000553844 547 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AL121839.1-201ENST00000556233 1185 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 CASC16-202ENST00000563844 610 ntTSL 3 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC138749.2-201ENST00000566048 167 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 UBE2FP2-201ENST00000566646 462 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC012414.6-201ENST00000568241 401 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 RPS7P1-201ENST00000571702 585 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AL158151.4-201ENST00000600965 507 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 OR7M1P-201ENST00000608946 533 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 MIR6885-201ENST00000612241 66 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC011472.4-201ENST00000615848 491 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 RN7SL680P-201ENST00000620379 299 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 AL157786.1-207ENST00000627771 695 ntBASIC8.72□□□□□ -1.01
ALDH1A1P00352 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
ALDH1A1P00352 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
ALDH1A1P00352 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.71□□□□□ -1.01
ALDH1A1P00352 AC117382.2-201ENST00000564748 3151 ntBASIC8.71□□□□□ -1.01
ALDH1A1P00352 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
ALDH1A1P00352 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC8.71□□□□□ -1.01
ALDH1A1P00352 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ALDH1A1P00352 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
ALDH1A1P00352 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ALDH1A1P00352 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ALDH1A1P00352 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.71□□□□□ -1.01
ALDH1A1P00352 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
ALDH1A1P00352 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC8.71□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms