Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
USH2AO75445 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC2.63□□□□□ -1.99
USH2AO75445 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
USH2AO75445 AC011455.2-201ENST00000599320 3336 ntBASIC2.63□□□□□ -1.99
USH2AO75445 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
USH2AO75445 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC2.62□□□□□ -1.99
USH2AO75445 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC2.62□□□□□ -1.99
USH2AO75445 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC2.62□□□□□ -1.99
USH2AO75445 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
USH2AO75445 RMRPP5-201ENST00000411156 267 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC2.62□□□□□ -1.99
USH2AO75445 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC2.62□□□□□ -1.99
USH2AO75445 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC2.62□□□□□ -1.99
USH2AO75445 AC055733.3-201ENST00000505214 523 ntBASIC2.62□□□□□ -1.99
USH2AO75445 RNU6-615P-201ENST00000516065 106 ntBASIC2.62□□□□□ -1.99
USH2AO75445 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
USH2AO75445 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.62□□□□□ -1.99
USH2AO75445 AP002373.2-201ENST00000541631 1060 ntBASIC2.62□□□□□ -1.99
USH2AO75445 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC2.62□□□□□ -1.99
USH2AO75445 AC027807.1-201ENST00000559921 996 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.62□□□□□ -1.99
USH2AO75445 MRPS21P7-201ENST00000566937 238 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AC011453.2-201ENST00000603737 729 ntBASIC2.62□□□□□ -1.99
USH2AO75445 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC2.62□□□□□ -1.99
USH2AO75445 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
USH2AO75445 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
USH2AO75445 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
USH2AO75445 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC2.62□□□□□ -1.99
USH2AO75445 ASNSP1-204ENST00000641977 1664 ntBASIC2.62□□□□□ -1.99
USH2AO75445 MIR208A-201ENST00000362287 71 ntBASIC2.62□□□□□ -1.99
USH2AO75445 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 IGBP1P3-201ENST00000447449 1000 ntBASIC2.62□□□□□ -1.99
USH2AO75445 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.62□□□□□ -1.99
USH2AO75445 LDHBP2-201ENST00000456969 1005 ntBASIC2.62□□□□□ -1.99
USH2AO75445 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 NMNAT1P5-201ENST00000559657 841 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 MIR6780A-201ENST00000615089 68 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 ZNF101P1-201ENST00000435701 1720 ntBASIC2.62□□□□□ -1.99
USH2AO75445 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
USH2AO75445 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC2.62□□□□□ -1.99
USH2AO75445 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
USH2AO75445 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
USH2AO75445 RPL23P2-201ENST00000320371 421 ntBASIC2.62□□□□□ -1.99
USH2AO75445 RNA5SP171-201ENST00000391071 115 ntBASIC2.62□□□□□ -1.99
USH2AO75445 RNA5SP44-201ENST00000410446 133 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AL357752.1-201ENST00000412817 349 ntBASIC2.62□□□□□ -1.99
USH2AO75445 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC2.62□□□□□ -1.99
USH2AO75445 AC092570.3-201ENST00000420113 693 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AC073264.2-201ENST00000448886 166 ntBASIC2.62□□□□□ -1.99
USH2AO75445 RPL37AP8-201ENST00000494116 276 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC2.62□□□□□ -1.99
USH2AO75445 OR9L1P-201ENST00000529493 933 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AL359704.2-201ENST00000604335 521 ntBASIC2.62□□□□□ -1.99
USH2AO75445 AC000068.2-201ENST00000608816 460 ntBASIC2.62□□□□□ -1.99
USH2AO75445 CYP4F35P-202ENST00000636121 390 ntBASIC2.62□□□□□ -1.99
USH2AO75445 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms