Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK2O43353 AC083862.1-201ENST00000427378 1242 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.33□□□□□ -1.4
RIPK2O43353 RPS3AP38-201ENST00000435889 763 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 CHCHD4P5-201ENST00000436684 427 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK2O43353 RBMY2AP-201ENST00000445405 1157 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 AL020997.1-201ENST00000446554 349 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 RBMY2CP-201ENST00000448575 1157 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 RBMY2DP-202ENST00000448881 1157 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK2O43353 RANP2-201ENST00000456833 229 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 RPS4XP19-201ENST00000460237 736 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.33□□□□□ -1.4
RIPK2O43353 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.33□□□□□ -1.4
RIPK2O43353 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK2O43353 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK2O43353 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK2O43353 AC097460.2-201ENST00000511857 741 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK2O43353 AC137549.1-201ENST00000514243 533 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 RN7SKP196-201ENST00000516267 345 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
RIPK2O43353 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK2O43353 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK2O43353 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.33□□□□□ -1.4
RIPK2O43353 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK2O43353 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.33□□□□□ -1.4
RIPK2O43353 MIR4312-201ENST00000579909 76 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 AP001357.1-201ENST00000586304 1053 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK2O43353 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK2O43353 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK2O43353 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK2O43353 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.33□□□□□ -1.4
RIPK2O43353 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK2O43353 AC025470.1-201ENST00000510053 2032 ntBASIC6.33□□□□□ -1.4
RIPK2O43353 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK2O43353 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.33□□□□□ -1.4
RIPK2O43353 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RIPK2O43353 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RIPK2O43353 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK2O43353 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK2O43353 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RIPK2O43353 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK2O43353 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 WDR95P-201ENST00000425638 1542 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 AC010329.1-201ENST00000593903 8328 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 RNU11-201ENST00000387069 134 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RIPK2O43353 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 YWHAZP5-201ENST00000419975 730 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 RPL5P10-201ENST00000445207 894 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 RPL6P24-201ENST00000445338 864 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK2O43353 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK2O43353 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK2O43353 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK2O43353 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK2O43353 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK2O43353 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK2O43353 AC005519.1-201ENST00000554490 601 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.32□□□□□ -1.4
RIPK2O43353 AL049779.3-201ENST00000557141 606 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.32□□□□□ -1.4
RIPK2O43353 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK2O43353 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.32□□□□□ -1.4
RIPK2O43353 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK2O43353 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.32□□□□□ -1.4
RIPK2O43353 AL360012.1-201ENST00000602813 131 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 AC114477.1-201ENST00000605097 605 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.32□□□□□ -1.4
RIPK2O43353 AL137000.1-201ENST00000610528 1244 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 MIR6762-201ENST00000613340 86 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 AC018628.1-201ENST00000624147 3819 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.32□□□□□ -1.4
RIPK2O43353 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RIPK2O43353 AL359091.1-201ENST00000449048 1734 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.32□□□□□ -1.4
RIPK2O43353 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIPK2O43353 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.32□□□□□ -1.4
RIPK2O43353 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.32□□□□□ -1.4
RIPK2O43353 AC005702.3-201ENST00000585345 1447 ntBASIC6.32□□□□□ -1.4
RIPK2O43353 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.31□□□□□ -1.4
RIPK2O43353 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RIPK2O43353 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIPK2O43353 AL136984.1-201ENST00000607611 1893 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 RN7SKP191-201ENST00000364713 306 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 FDPSP5-201ENST00000399474 1057 ntBASIC6.31□□□□□ -1.4
RIPK2O43353 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.31□□□□□ -1.4
RIPK2O43353 AC024937.2-201ENST00000411669 1242 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms