Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM38O00635 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM38O00635 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
TRIM38O00635 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM38O00635 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM38O00635 AC087565.3-202ENST00000642085 1603 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM38O00635 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
TRIM38O00635 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC009779.8-201ENST00000641684 4384 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC093909.5-201ENST00000621839 1799 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM38O00635 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 RNA5SP232-201ENST00000364144 119 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TRIM38O00635 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 MIR1275-201ENST00000408770 80 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM38O00635 AL353626.3-201ENST00000413399 657 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 VN1R31P-201ENST00000417498 730 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 OR6R1P-201ENST00000431838 940 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 AL451136.1-201ENST00000435399 325 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 SDR42E1P3-201ENST00000438345 502 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 GAPDHP20-201ENST00000444107 1007 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 AL358876.1-201ENST00000453364 1075 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 AC118758.1-202ENST00000454719 225 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 RN7SL216P-201ENST00000471607 298 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 RN7SL170P-201ENST00000487098 295 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 OR9N1P-201ENST00000491296 333 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM38O00635 RNU6-467P-201ENST00000517027 110 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.68□□□□□ -1.34
TRIM38O00635 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC020914.7-201ENST00000594477 545 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.68□□□□□ -1.34
TRIM38O00635 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC007255.2-201ENST00000604053 631 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 AC012676.3-201ENST00000614983 479 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
TRIM38O00635 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.68□□□□□ -1.34
TRIM38O00635 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TRIM38O00635 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TRIM38O00635 LCOR-201ENST00000286067 4542 ntBASIC6.68□□□□□ -1.34
TRIM38O00635 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 AC025809.2-201ENST00000625085 1802 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AC024341.1-201ENST00000526444 1552 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.67□□□□□ -1.34
TRIM38O00635 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 RNU1-65P-201ENST00000363919 148 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 RNA5SP140-201ENST00000364524 92 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AL353625.1-202ENST00000366273 571 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM38O00635 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRIM38O00635 AC007068.1-201ENST00000396690 844 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.67□□□□□ -1.34
TRIM38O00635 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.67□□□□□ -1.34
TRIM38O00635 SETP10-201ENST00000424368 814 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 RPS10P21-201ENST00000430654 475 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AL590128.1-201ENST00000433407 286 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 AC097359.1-201ENST00000447946 463 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 RPL23AP28-201ENST00000448062 470 ntBASIC6.67□□□□□ -1.34
TRIM38O00635 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.67□□□□□ -1.34
TRIM38O00635 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms