Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01613-201ENST00000561476 2780 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AP004289.1-201ENST00000436307 2205 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC068769.1-201ENST00000474767 2426 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RNU1-84P-201ENST00000365447 164 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LCN1P2-201ENST00000372030 223 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 MIR1275-201ENST00000408770 80 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RN7SKP161-201ENST00000411110 305 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL451063.1-201ENST00000450164 1133 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SNX18P26-201ENST00000458433 740 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC112484.3-201ENST00000505910 329 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 Vault.2-201ENST00000516519 98 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC011853.1-201ENST00000518911 454 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AP001804.1-201ENST00000526868 919 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC026956.1-201ENST00000558741 396 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC023968.1-201ENST00000560719 475 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC133552.4-201ENST00000576103 676 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL049840.6-202ENST00000603373 279 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC024589.2-201ENST00000605642 1294 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL591926.1-201ENST00000620542 217 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AP001264.1-201ENST00000620602 703 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC073593.1-201ENST00000624500 411 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC005702.3-201ENST00000585345 1447 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 OFD1P17-201ENST00000437639 3018 ntBASIC5.12□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01616-201ENST00000561816 2280 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC110373.1-201ENST00000505994 3505 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RNA5SP77-201ENST00000365394 120 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 MRPS21P5-201ENST00000417885 231 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RPL7AP14-201ENST00000424041 802 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 VN1R20P-201ENST00000425215 966 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC003989.1-201ENST00000434569 565 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AL020997.1-201ENST00000446554 349 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CTSLP6-201ENST00000458273 1002 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC104339.1-201ENST00000465478 348 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 H3F3AP5-201ENST00000475267 429 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 RN7SL170P-201ENST00000487098 295 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC021006.1-201ENST00000489849 553 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SNORA74.1-201ENST00000516320 180 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 CYCSP25-201ENST00000525280 316 ntBASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.11□□□□□ -1.59
TCRBV4S1A1TA0A5B7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms