Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC006065.2-201ENST00000536978 211 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 EIF4A1P4-201ENST00000550578 1213 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 FGF7P1-201ENST00000582820 288 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AL078623.1-201ENST00000602702 907 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AL035417.2-201ENST00000603887 796 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 RPL17P3-201ENST00000605695 525 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC128687.2-201ENST00000609657 566 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 STMN1P1-201ENST00000617809 440 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 AC012414.7-202ENST00000622705 1090 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 CR381653.2-201ENST00000624041 768 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 TNFSF15-201ENST00000374044 2789 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 MAPK10-377ENST00000642006 2752 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 TEX21P-201ENST00000447107 1476 ntBASIC7.81□□□□□ -1.16
PCDHGA11Q9Y5H2 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 KYNUP3-201ENST00000574386 1341 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC006058.1-201ENST00000568686 5067 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC061975.7-201ENST00000592016 2692 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 NSRP1P1-201ENST00000444067 1693 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 MTND5P26-201ENST00000426018 1752 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC093909.5-201ENST00000621839 1799 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 RNU6-621P-201ENST00000364752 109 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 RNU6-348P-201ENST00000384386 107 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 RN7SKP56-201ENST00000410513 331 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC002524.1-201ENST00000411687 547 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC003080.1-201ENST00000413552 767 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 RPL7AP72-201ENST00000417266 768 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 RBM22P7-201ENST00000421321 280 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 ACTBP12-201ENST00000435871 418 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 HMGN1P32-201ENST00000441744 256 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC004865.1-201ENST00000442276 1003 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AL451081.2-201ENST00000448115 933 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 NANOGNBP1-201ENST00000448444 480 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 EPS15P1-201ENST00000448836 336 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 SAP18P3-201ENST00000449663 396 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 PNPLA4P1-201ENST00000458328 305 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC008799.1-201ENST00000495909 457 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC113208.1-201ENST00000497944 318 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 CYP4F27P-201ENST00000514557 494 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC083906.4-201ENST00000514634 987 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC096661.1-201ENST00000515870 822 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 RNU6-1308P-201ENST00000516817 103 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 OR8Q1P-201ENST00000526467 655 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AP005597.3-201ENST00000532369 799 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 NIFKP8-201ENST00000560500 874 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC009101.1-201ENST00000568135 242 ntBASIC7.8□□□□□ -1.16
PCDHGA11Q9Y5H2 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms