Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 USP9YP3-201ENST00000434481 1766 ntBASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 CAP1P2-201ENST00000417455 1409 ntBASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 AKAP17BP-201ENST00000431706 2719 ntBASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 TMCC1P1-201ENST00000518897 1980 ntBASIC4.44□□□□□ -1.7
LINC00588Q9Y4M8 AC120036.2-201ENST00000509729 1474 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 CASC19-246ENST00000641625 1606 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC062022.1-201ENST00000451026 1684 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 OR2M1P-201ENST00000318104 951 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 RN7SKP237-201ENST00000364663 301 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 MIR188-201ENST00000385034 86 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 RBBP4P5-201ENST00000398583 1266 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AL713922.1-201ENST00000416477 747 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 MTND2P12-201ENST00000417560 1252 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 OR5W1P-201ENST00000423705 938 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 RPL7AP14-201ENST00000424041 802 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AL139415.1-201ENST00000424862 352 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 GAPDHP59-201ENST00000435908 267 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 EMC3-AS1-205ENST00000438698 534 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 GTF2IP14-201ENST00000441415 586 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 CCNJP2-201ENST00000457810 1163 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 CTSLP6-201ENST00000458273 1002 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 CR383656.1-201ENST00000484916 377 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 RN7SL170P-201ENST00000487098 295 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC018797.1-201ENST00000510791 255 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC011853.1-201ENST00000518911 454 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC073046.2-201ENST00000604756 527 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AL135999.3-201ENST00000610501 812 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AL445647.2-201ENST00000615170 130 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AL109924.4-201ENST00000623089 670 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC073593.1-201ENST00000624500 411 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC073365.1-203ENST00000641055 1992 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC007159.1-201ENST00000566529 4706 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 AC105114.1-201ENST00000624795 1862 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 CTNNA1P1-201ENST00000515849 2728 ntBASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00588Q9Y4M8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00588Q9Y4M8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00588Q9Y4M8 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00588Q9Y4M8 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
LINC00588Q9Y4M8 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00588Q9Y4M8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC4.42□□□□□ -1.7
LINC00588Q9Y4M8 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00588Q9Y4M8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms