Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RN7SL796P-201ENST00000613991 291 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC119619.1-201ENST00000619728 112 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC005383.1-201ENST00000622689 534 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC091905.1-201ENST00000624400 311 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 CCDC163-207ENST00000629482 953 ntAPPRIS P5 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AC024610.2-203ENST00000636084 1348 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 LYARP1-201ENST00000436977 1501 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AP003972.1-201ENST00000625192 5446 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 AL445933.1-201ENST00000434240 2242 ntBASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC8.68□□□□□ -1.02
VPS9D1Q9Y2B5 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 RNU6-379P-201ENST00000363813 104 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 CENPW-201ENST00000368325 528 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 RNU6-510P-201ENST00000391239 108 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC084880.1-201ENST00000392530 545 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC011893.1-201ENST00000437007 1862 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 PGBD4P3-201ENST00000440731 581 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 RPL5P25-201ENST00000441148 775 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 LHFPL3-AS2-201ENST00000453666 923 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AL139156.3-201ENST00000454802 394 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 HMGN2P26-201ENST00000463169 339 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 RN7SL754P-201ENST00000470784 266 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 RPL5P12-201ENST00000477071 851 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 RPL7P39-201ENST00000481157 744 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC074198.1-201ENST00000506546 1397 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC005741.1-201ENST00000511094 432 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 GAPDHP35-201ENST00000513369 976 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 CYP4F27P-201ENST00000514557 494 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 Y_RNA.691-201ENST00000516611 103 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC022878.1-201ENST00000530684 149 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC022880.2-201ENST00000532664 270 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 LMO3-222ENST00000540445 906 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC138466.2-201ENST00000540993 304 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC137527.1-201ENST00000565839 1261 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 RN7SL474P-201ENST00000583485 301 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC005357.1-201ENST00000588399 301 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC010928.1-201ENST00000592477 1447 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AL391646.1-201ENST00000603860 190 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC024085.1-201ENST00000604299 432 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 SRGAP2D-201ENST00000605551 1021 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 uc_338.3-201ENST00000613268 181 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC215522.1-201ENST00000615488 446 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC005086.2-201ENST00000624939 228 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC093591.3-201ENST00000634516 308 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 AC110994.2-201ENST00000635481 492 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 CASC19-212ENST00000641153 1287 ntBASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS9D1Q9Y2B5 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms