Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC090888.3-201ENST00000558917 509 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 MIR4701-201ENST00000583094 63 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 GLYATL1P2-202ENST00000588046 902 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC005332.4-201ENST00000592752 579 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AL080312.2-201ENST00000613001 630 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AC073862.4-201ENST00000622982 854 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 AL132640.3-201ENST00000630473 177 ntBASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLCF1Q9UBD9 IFIT1P1-201ENST00000400497 1449 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 STAG3L4-201ENST00000352103 530 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 RNA5SP346-201ENST00000363541 121 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 RPL7AP14-201ENST00000424041 802 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AL354707.3-201ENST00000427308 331 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 OR52I1-201ENST00000450052 1050 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AL133351.3-201ENST00000454998 193 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 Z83838.1-202ENST00000456225 839 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 RN7SL326P-201ENST00000477493 296 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 RPL12P30-201ENST00000488389 499 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 SNX18P24-201ENST00000505249 671 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC095052.1-201ENST00000509955 863 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 LDHBP3-201ENST00000514909 822 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 NATP-201ENST00000523491 878 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AP005136.2-201ENST00000583253 1049 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC097467.4-201ENST00000605504 141 ntBASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.65□□□□□ -1.5
CLCF1Q9UBD9 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CLCF1Q9UBD9 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AC013488.1-201ENST00000526618 1838 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 OR7E156P-201ENST00000400303 464 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 U3.43-201ENST00000410734 213 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms