Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
BRF2Q9HAW0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AL022323.4-201ENST00000623980 13120 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 RNU6-618P-201ENST00000363518 112 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC245036.1-201ENST00000391727 309 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 CDC42P6-201ENST00000421246 576 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 VN1R53P-201ENST00000429536 957 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AKR1D1P1-201ENST00000457236 936 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 MTND2P31-201ENST00000512602 616 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 MINOS1P4-201ENST00000515470 318 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 RNU6-319P-201ENST00000516025 108 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 SCARNA11.1-201ENST00000516918 132 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 IGKV1D-22-201ENST00000518953 324 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 RBM7-208ENST00000545678 867 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 OR7E19P-202ENST00000589942 844 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC005520.3-201ENST00000602874 370 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC012175.1-201ENST00000603755 531 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC114477.1-201ENST00000605097 605 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 AC004836.1-201ENST00000623032 634 ntBASIC6.22□□□□□ -1.41
BRF2Q9HAW0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.22□□□□□ -1.41
BRF2Q9HAW0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
BRF2Q9HAW0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
BRF2Q9HAW0 AC105749.1-201ENST00000631338 2008 ntBASIC6.21□□□□□ -1.41
BRF2Q9HAW0 AC087565.3-202ENST00000642085 1603 ntBASIC6.21□□□□□ -1.41
BRF2Q9HAW0 ZNF658B-201ENST00000602828 3408 ntBASIC6.21□□□□□ -1.41
BRF2Q9HAW0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
BRF2Q9HAW0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.21□□□□□ -1.41
BRF2Q9HAW0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 OR10AB1P-202ENST00000641219 1686 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 AC010894.1-201ENST00000313760 361 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 SNORD8-201ENST00000363915 110 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 AL391419.1-201ENST00000398901 1275 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 AL353133.1-201ENST00000407695 401 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 AL512504.1-201ENST00000415494 778 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 AL139184.1-202ENST00000422303 222 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 AL589794.1-201ENST00000424971 390 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 BMS1P11-201ENST00000442351 885 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 AL513343.1-201ENST00000451818 792 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 TREML3P-201ENST00000457327 501 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 BMS1P9-201ENST00000457640 885 ntBASIC6.21□□□□□ -1.42
BRF2Q9HAW0 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.21□□□□□ -1.42
BRF2Q9HAW0 RN7SL70P-201ENST00000478322 302 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms