Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SNORA70H-201ENST00000383910 135 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 SNORA70J-201ENST00000384182 135 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AL157884.1-201ENST00000424561 454 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 RPL12P24-201ENST00000474907 486 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AC015524.1-201ENST00000491585 472 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 OR4A40P-201ENST00000533878 948 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AC090115.2-201ENST00000548060 883 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AP001962.1-201ENST00000624114 559 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 AL662795.2-201ENST00000624252 3706 ntBASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.56□□□□□ -1.2
UPF3BQ9BZI7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AL117378.2-201ENST00000622916 1337 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 HSPD1P8-201ENST00000400121 1658 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 RNA5SP232-201ENST00000364144 119 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 RN7SKP86-201ENST00000410454 332 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 GTF2IP14-201ENST00000441415 586 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 RPS27AP3-201ENST00000453803 454 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AC106800.3-201ENST00000511389 308 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AC009120.3-201ENST00000563335 499 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 MIR3189-201ENST00000578735 73 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AC010401.2-201ENST00000575137 4934 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 AC127024.8-201ENST00000623719 2094 ntBASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UPF3BQ9BZI7 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AL022237.1-201ENST00000446663 358 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC005363.1-201ENST00000530779 351 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 OR4H6P-201ENST00000563771 921 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 MIR4732-201ENST00000581873 76 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 MIR6862-1-201ENST00000613016 70 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 MIR6862-2-201ENST00000614755 70 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC020763.5-201ENST00000623298 430 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC018659.2-201ENST00000624690 715 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 AOX3P-204ENST00000491025 2107 ntBASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.54□□□□□ -1.2
UPF3BQ9BZI7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms