Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TRIM55Q9BYV6 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 U6.112-201ENST00000384129 70 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 NUS1P4-201ENST00000401550 585 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 MEAF6P1-201ENST00000416092 327 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC023128.2-201ENST00000420880 1223 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 RPSAP1-201ENST00000421328 880 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AL035458.1-201ENST00000433096 585 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC239800.1-201ENST00000442049 719 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 CCNJP1-201ENST00000450600 1149 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC239798.3-201ENST00000454459 408 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 RN7SL19P-201ENST00000462522 306 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 RPL6P9-201ENST00000466502 859 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC134050.1-201ENST00000495088 933 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC021106.1-201ENST00000509020 1058 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC106800.2-201ENST00000514009 1103 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 RNU6-1308P-201ENST00000516817 103 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 RNU6-1028P-201ENST00000517164 93 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 MTATP6P15-201ENST00000527233 835 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 UBTFL10-201ENST00000528532 562 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 OR4U1P-201ENST00000554958 912 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 MIR6774-201ENST00000614651 70 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC119674.1-209ENST00000642031 997 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 AC099786.3-201ENST00000565735 1410 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 ZNF849P-201ENST00000594711 1566 ntBASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRIM55Q9BYV6 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 MT-TP-201ENST00000387461 68 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 RN7SKP97-201ENST00000410966 333 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 GEMIN2P2-201ENST00000418195 715 ntBASIC7.23□□□□□ -1.25
TRIM55Q9BYV6 DNAJA1P1-201ENST00000425106 1187 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms