Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 AC012213.2-201ENST00000562917 4597 ntBASIC5.74□□□□□ -1.49
RSPO3Q9BXY4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 CCAT2-201ENST00000630920 1752 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 MIR621-201ENST00000384919 96 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AL121835.1-201ENST00000404250 354 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC092651.1-201ENST00000426110 312 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC112492.2-201ENST00000432774 1030 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 PSMD8P1-201ENST00000436275 769 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC079922.1-201ENST00000443291 359 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AL512593.1-201ENST00000444758 779 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 NPM1P9-201ENST00000453156 844 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AP003385.3-201ENST00000472498 287 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AL355032.1-201ENST00000472981 438 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 RPS7P11-201ENST00000484240 586 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC015524.1-201ENST00000491585 472 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC114324.2-202ENST00000503812 134 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AP001804.1-201ENST00000526868 919 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC244502.2-201ENST00000543361 851 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC063977.7-201ENST00000594454 337 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 GAPDHP41-201ENST00000613707 975 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC010998.3-201ENST00000613871 631 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC211486.4-201ENST00000621495 113 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC116667.2-201ENST00000641075 823 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RSPO3Q9BXY4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC024587.1-201ENST00000505925 2157 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 RNU1-49P-201ENST00000363468 159 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 RNU1-59P-201ENST00000364829 162 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 RNA5SP77-201ENST00000365394 120 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 OR2L9P-201ENST00000444456 913 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AL445687.2-201ENST00000458156 728 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AL117692.1-201ENST00000494283 713 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 SNX18P24-201ENST00000505249 671 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 OR4D12P-201ENST00000509361 911 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC010343.2-201ENST00000510162 224 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC092865.1-201ENST00000544395 1023 ntBASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.72□□□□□ -1.49
RSPO3Q9BXY4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms