Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VGLL1Q99990 EEF1A1P28-201ENST00000450915 1403 ntBASIC4.9□□□□□ -1.62
VGLL1Q99990 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
VGLL1Q99990 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VGLL1Q99990 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC4.9□□□□□ -1.62
VGLL1Q99990 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.9□□□□□ -1.62
VGLL1Q99990 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VGLL1Q99990 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.62
VGLL1Q99990 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VGLL1Q99990 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VGLL1Q99990 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VGLL1Q99990 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
VGLL1Q99990 RNA5SP350-201ENST00000363298 111 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 OR6K3-202ENST00000368146 996 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.9□□□□□ -1.63
VGLL1Q99990 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VGLL1Q99990 RNU1-56P-201ENST00000391303 164 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 UBBP1-201ENST00000392399 473 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VGLL1Q99990 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VGLL1Q99990 SNORA11D-201ENST00000408548 128 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 SNORA11E-201ENST00000408778 128 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC116036.1-201ENST00000412199 367 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.9□□□□□ -1.63
VGLL1Q99990 CYCSP52-201ENST00000422857 310 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 PUDPP2-201ENST00000431423 643 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC4.9□□□□□ -1.63
VGLL1Q99990 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC4.9□□□□□ -1.63
VGLL1Q99990 SNRPBP1-201ENST00000443634 282 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC236972.4-201ENST00000458091 963 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 RPS16P9-201ENST00000477220 427 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 SETP12-201ENST00000514068 805 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC010442.1-201ENST00000515583 816 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 RNA5SP318-201ENST00000516352 92 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.9□□□□□ -1.63
VGLL1Q99990 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.9□□□□□ -1.63
VGLL1Q99990 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.9□□□□□ -1.63
VGLL1Q99990 AP001994.1-201ENST00000527539 826 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.9□□□□□ -1.63
VGLL1Q99990 NF1P12-201ENST00000549593 583 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.9□□□□□ -1.63
VGLL1Q99990 AL162632.2-201ENST00000553933 399 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AL731537.2-201ENST00000561565 951 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.9□□□□□ -1.63
VGLL1Q99990 ANP32BP1-202ENST00000568553 737 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC091167.5-201ENST00000605689 894 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.9□□□□□ -1.63
VGLL1Q99990 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 MRPL57P3-201ENST00000619218 176 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AP003400.2-201ENST00000624036 666 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.9□□□□□ -1.63
VGLL1Q99990 AL163152.1-201ENST00000642001 374 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VGLL1Q99990 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VGLL1Q99990 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VGLL1Q99990 CR383656.5-201ENST00000547616 1340 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC4.9□□□□□ -1.63
VGLL1Q99990 AC011369.2-201ENST00000624423 1567 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 AC004656.1-201ENST00000568479 4951 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VGLL1Q99990 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.9□□□□□ -1.63
VGLL1Q99990 AL591135.1-201ENST00000401578 5914 ntBASIC4.9□□□□□ -1.63
VGLL1Q99990 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.9□□□□□ -1.63
VGLL1Q99990 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 CAP1P2-201ENST00000417455 1409 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 LINC01616-201ENST00000561816 2280 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC009831.5-201ENST00000624000 3189 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC093671.1-201ENST00000624981 2929 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VGLL1Q99990 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 RPS17P17-201ENST00000419392 409 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 SPATA20P1-201ENST00000423089 438 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.89□□□□□ -1.63
VGLL1Q99990 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VGLL1Q99990 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.89□□□□□ -1.63
VGLL1Q99990 AC239800.1-201ENST00000442049 719 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.89□□□□□ -1.63
VGLL1Q99990 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.89□□□□□ -1.63
VGLL1Q99990 SCDP1-201ENST00000455244 1081 ntBASIC4.89□□□□□ -1.63
VGLL1Q99990 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms