Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 IGHV3-57-201ENST00000520143 280 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AC010333.3-201ENST00000615100 402 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AC034229.6-201ENST00000623704 224 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 COL6A4P1-202ENST00000487147 4317 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 Z97989.1-201ENST00000531702 2421 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 KYNUP3-201ENST00000574386 1341 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 RNU1-32P-201ENST00000363937 159 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 RNA5SP339-201ENST00000390987 122 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AC005033.1-201ENST00000428904 813 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AC092647.3-201ENST00000443044 633 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 RPL31P44-201ENST00000447680 377 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 RN7SL97P-201ENST00000486780 299 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 SSX8-201ENST00000506270 579 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AC009704.2-201ENST00000618739 483 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 AP000346.3-201ENST00000622821 210 ntBASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.08□□□□□ -1.6
CSMD1Q96PZ7 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AF131215.2-201ENST00000531549 1710 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 PARP4P2-201ENST00000446672 3326 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 RPS3AP53-201ENST00000454716 778 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC093166.4-201ENST00000457867 318 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 NENFP3-201ENST00000503735 313 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC147055.3-201ENST00000510547 851 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 BNIP3P1-201ENST00000547295 580 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC131971.1-201ENST00000332881 1482 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 SEPSECS-202ENST00000382103 5496 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC125238.2-201ENST00000430003 1440 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC005034.3-201ENST00000604845 1747 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 NRIR-201ENST00000366140 799 ntTSL 3 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 RBMY2QP-201ENST00000429799 1147 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC004825.1-201ENST00000555068 586 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AL121579.2-201ENST00000555466 590 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC087385.3-201ENST00000620477 187 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC091953.3-201ENST00000623220 236 ntBASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 TXNL1-201ENST00000217515 6894 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CSMD1Q96PZ7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
CSMD1Q96PZ7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms