Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 NPM1P25-201ENST00000429734 854 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC009237.1-201ENST00000442127 744 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC093166.3-201ENST00000448785 303 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC092967.1-201ENST00000449016 481 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC104339.1-201ENST00000465478 348 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 HSD3BP3-201ENST00000514706 994 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AP001858.2-201ENST00000536213 601 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AL591167.1-201ENST00000607321 456 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AL357140.4-201ENST00000636827 412 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AL391261.1-201ENST00000555712 1479 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 BIN2P1-201ENST00000504996 1530 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AC107977.1-201ENST00000355745 939 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 HIGD1AP16-201ENST00000450986 258 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AC118758.1-202ENST00000454719 225 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 CTSLP6-201ENST00000458273 1002 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 MTND6P8-201ENST00000503471 522 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AC002519.2-203ENST00000567043 837 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 SETP3-201ENST00000581726 813 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 DYNLL1P1-201ENST00000595442 269 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 AC105749.1-201ENST00000631338 2008 ntBASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.31□□□□□ -1.4
ECHDC3Q96DC8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 RNU1-49P-201ENST00000363468 159 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 RNU1-65P-201ENST00000363919 148 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 RPSAP40-201ENST00000442343 891 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 VPS25P1-201ENST00000455691 508 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 RN7SL254P-201ENST00000460609 284 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 RN7SL168P-201ENST00000463821 279 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 RPL12P30-201ENST00000488389 499 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC021006.1-201ENST00000489849 553 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC122718.2-201ENST00000505325 591 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 Vault.2-201ENST00000516519 98 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 NPIPB14P-203ENST00000532298 987 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC026826.3-201ENST00000561747 158 ntBASIC6.3□□□□□ -1.4
ECHDC3Q96DC8 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms