Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ASB8-202ENST00000535055 657 ntTSL 2 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 BIN2P1-201ENST00000504996 1530 ntBASIC10.16□□□□□ -0.78
TOPBP1Q92547 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
TOPBP1Q92547 AP003972.1-201ENST00000625192 5446 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
TOPBP1Q92547 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
TOPBP1Q92547 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
TOPBP1Q92547 RN7SKP115-201ENST00000363177 317 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
TOPBP1Q92547 RPL35AP24-201ENST00000413846 330 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 TNPO1P1-201ENST00000423641 1138 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 EEF1B2P5-201ENST00000444820 548 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 MORF4L1P4-201ENST00000450245 976 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 AC105420.1-201ENST00000504389 582 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
TOPBP1Q92547 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 HAUS8P1-201ENST00000549005 542 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 RNU4ATAC-201ENST00000580972 127 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 FKBP1AP1-201ENST00000594588 318 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 AC097467.4-201ENST00000605504 141 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 AL359513.1-201ENST00000614364 557 ntBASIC10.15□□□□□ -0.78
TOPBP1Q92547 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC10.15□□□□□ -0.78
TOPBP1Q92547 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC10.15□□□□□ -0.79
TOPBP1Q92547 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC10.15□□□□□ -0.79
TOPBP1Q92547 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
TOPBP1Q92547 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
TOPBP1Q92547 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 MRPL53P1-201ENST00000414323 319 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 AC109481.1-201ENST00000509173 282 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 CDH12P4-201ENST00000517835 295 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 CDH12P3-201ENST00000517935 295 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 CDH12P1-201ENST00000518435 295 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 OR6M2P-201ENST00000529831 871 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 OR8G3P-201ENST00000533406 921 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 OR7A11P-201ENST00000597719 953 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 HCG18-243ENST00000602498 327 ntTSL 3 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 AL137246.2-201ENST00000613439 662 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 AC008115.4-201ENST00000619780 775 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 METTL15-211ENST00000634762 718 ntTSL 5 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 AL161756.3-201ENST00000641216 2071 ntBASIC10.14□□□□□ -0.79
TOPBP1Q92547 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC10.14□□□□□ -0.79
TOPBP1Q92547 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
TOPBP1Q92547 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 GAPDHP24-201ENST00000328713 983 ntBASIC10.13□□□□□ -0.79
TOPBP1Q92547 RNA5SP507-201ENST00000363603 121 ntBASIC10.13□□□□□ -0.79
TOPBP1Q92547 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 IGKV1OR10-1-201ENST00000442306 329 ntBASIC10.13□□□□□ -0.79
TOPBP1Q92547 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 CBX1P5-201ENST00000475330 559 ntBASIC10.13□□□□□ -0.79
TOPBP1Q92547 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOPBP1Q92547 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOPBP1Q92547 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOPBP1Q92547 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOPBP1Q92547 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOPBP1Q92547 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOPBP1Q92547 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
TOPBP1Q92547 AC245060.6-201ENST00000624350 8420 ntBASIC10.13□□□□□ -0.79
TOPBP1Q92547 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
TOPBP1Q92547 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
TOPBP1Q92547 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 RPA2P2-201ENST00000419698 796 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 AL139415.1-201ENST00000424862 352 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 RPL12P3-201ENST00000440080 396 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 RPS7P3-201ENST00000443360 580 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC10.12□□□□□ -0.79
TOPBP1Q92547 RN7SL808P-201ENST00000496066 299 ntBASIC10.12□□□□□ -0.79
TOPBP1Q92547 AC008629.2-201ENST00000503783 483 ntBASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms