Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 CKS1BP1-201ENST00000555221 240 ntBASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 AP001496.3-201ENST00000580230 913 ntBASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 AL133247.2-201ENST00000603236 482 ntBASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 AC097467.4-201ENST00000605504 141 ntBASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 AC012510.1-201ENST00000607946 759 ntBASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 MAPK10-350ENST00000641777 965 ntBASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 HSPD1P8-201ENST00000400121 1658 ntBASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
DNAAF1Q8NEP3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC093909.5-201ENST00000621839 1799 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 SNORD51.1-201ENST00000365405 77 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 ST13P16-201ENST00000401760 781 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 MIR1231-201ENST00000408101 92 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC007568.1-201ENST00000422912 471 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AL590399.4-201ENST00000436561 601 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 PHBP4-201ENST00000437447 837 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC009518.3-201ENST00000438972 253 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 RPL6P24-201ENST00000445338 864 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 TVP23CP1-201ENST00000450317 639 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AL135933.1-201ENST00000498657 802 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC138409.2-202ENST00000507274 458 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 SETP21-201ENST00000514799 892 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 RN7SKP67-201ENST00000515905 235 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 OR52K3P-201ENST00000531655 943 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 SSU72P6-201ENST00000532644 488 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC027176.2-201ENST00000559166 746 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC106785.4-201ENST00000569492 412 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC104117.5-201ENST00000606195 547 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AP000240.1-201ENST00000609910 452 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC084824.5-201ENST00000612009 413 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AL161931.1-201ENST00000612768 246 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 AC079298.2-201ENST00000623885 459 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 MIR665-201ENST00000635949 72 ntBASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
DNAAF1Q8NEP3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms