Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AL590065.1-201ENST00000603371 4774 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 Y_RNA.359-201ENST00000365498 102 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 SSX6-201ENST00000376932 562 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 MED15P9-201ENST00000424716 533 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AL392003.1-201ENST00000434394 243 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 RPL5P4-201ENST00000434805 886 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 OTX2P1-201ENST00000450956 354 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC126182.1-201ENST00000478134 357 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 LINC00888-204ENST00000487386 421 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 TPT1P3-201ENST00000492841 512 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 FCF1P3-201ENST00000496394 590 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC093890.1-201ENST00000502554 540 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC109458.1-201ENST00000508858 316 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC095059.2-201ENST00000510601 933 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC079140.3-201ENST00000511111 550 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AP002963.1-201ENST00000530590 184 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 SETP17-201ENST00000534163 817 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 HIGD1AP9-201ENST00000550710 279 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 DNM1P31-201ENST00000564149 696 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 DHFRP1-201ENST00000579682 559 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 PRELID3BP3-201ENST00000584963 545 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC022001.1-201ENST00000605193 268 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC090186.1-201ENST00000605991 572 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 OR2BH1P-201ENST00000608850 864 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AL022238.3-201ENST00000609279 443 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC143336.1-201ENST00000614164 836 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC063943.3-201ENST00000615562 356 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC068234.2-201ENST00000619646 522 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC023632.6-201ENST00000624338 2177 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 SNORA43.5-201ENST00000631270 138 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC016582.3-206ENST00000636547 207 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AL591543.1-202ENST00000642095 4149 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 ST7-213ENST00000432298 1956 ntTSL 2 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC090643.1-201ENST00000623600 3100 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 AC018688.1-201ENST00000636528 1754 ntBASIC6.8□□□□□ -1.32
ATG4DQ86TL0 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ATG4DQ86TL0 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 Y_RNA.61-201ENST00000362835 102 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 RNA5SP448-201ENST00000363151 111 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ATG4DQ86TL0 SNORA2C-201ENST00000408564 137 ntBASIC6.79□□□□□ -1.32
ATG4DQ86TL0 RN7SKP225-201ENST00000410405 352 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms