Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CARSP2-201ENST00000520688 277 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 MIR4800-201ENST00000537353 80 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 NF1P12-201ENST00000549593 583 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 RPS27AP19-201ENST00000597285 458 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC096586.2-201ENST00000610260 441 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC018558.4-201ENST00000622153 281 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL132640.3-201ENST00000630473 177 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHFQ7M4L6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHFQ7M4L6 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHFQ7M4L6 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHFQ7M4L6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHFQ7M4L6 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.83□□□□□ -1.48
SHFQ7M4L6 AL592429.1-201ENST00000403909 1473 ntBASIC5.83□□□□□ -1.48
SHFQ7M4L6 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 Y_RNA.110-201ENST00000363220 99 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 RNU6-670P-201ENST00000364312 104 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 REG1CP-206ENST00000447469 496 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 CYCSP53-201ENST00000455540 265 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 TRBV8-1-201ENST00000481590 279 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 AF305872.1-201ENST00000485217 471 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 RN7SL868P-201ENST00000485915 303 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 MTND3P3-201ENST00000505004 126 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC112184.1-201ENST00000505179 312 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 OR52H2P-201ENST00000514607 902 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC104997.1-201ENST00000519761 717 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 AP001804.1-201ENST00000526868 919 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC019227.1-201ENST00000526902 510 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC233702.7-202ENST00000582941 211 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC024589.2-201ENST00000605642 1294 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC009032.1-201ENST00000617574 431 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC005355.2-201ENST00000625064 484 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 AC105235.1-201ENST00000623208 1816 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 BIN2P1-201ENST00000504996 1530 ntBASIC5.82□□□□□ -1.48
SHFQ7M4L6 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.82□□□□□ -1.48
SHFQ7M4L6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHFQ7M4L6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC092724.1-201ENST00000624623 3397 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC130360.2-201ENST00000533477 1556 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 TUBBP10-201ENST00000427668 1301 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms