Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 SNX18P3-202ENST00000565670 1750 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 LCN1P2-201ENST00000372030 223 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 SNORA51.9-201ENST00000384295 124 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AC005522.1-201ENST00000395416 346 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 LYPLA1P3-201ENST00000402650 695 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AC112492.2-201ENST00000432774 1030 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AL645936.1-201ENST00000441979 518 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 NDUFA5P8-201ENST00000449019 346 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AC068228.1-201ENST00000461723 211 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 SNX18P24-201ENST00000505249 671 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AL049874.4-201ENST00000557593 255 ntBASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.1□□□□□ -1.27
TRIM71Q2Q1W2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC023245.2-201ENST00000530760 2978 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC016251.2-201ENST00000623393 3089 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 RNA5SP110-201ENST00000362638 115 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 RNU4-23P-201ENST00000362839 140 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 LDHAP2-201ENST00000437325 985 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 CEACAMP5-201ENST00000448037 961 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 RN7SL643P-201ENST00000471845 291 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 MORF4L2P1-201ENST00000503761 858 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC095052.1-201ENST00000509955 863 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 CCNHP1-201ENST00000513311 678 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 HNRNPRP2-201ENST00000528421 743 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 MRPS21P8-201ENST00000569196 235 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 LINC00556-201ENST00000569603 412 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 BUB1P1-201ENST00000603541 607 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AC092266.1-201ENST00000610958 165 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AL096712.1-201ENST00000614561 159 ntBASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.09□□□□□ -1.27
TRIM71Q2Q1W2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.09□□□□□ -1.28
TRIM71Q2Q1W2 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.09□□□□□ -1.28
TRIM71Q2Q1W2 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
TRIM71Q2Q1W2 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.09□□□□□ -1.28
TRIM71Q2Q1W2 AL354854.1-201ENST00000455940 1363 ntBASIC7.08□□□□□ -1.28
TRIM71Q2Q1W2 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.08□□□□□ -1.28
TRIM71Q2Q1W2 AC007406.5-201ENST00000570140 3170 ntBASIC7.08□□□□□ -1.28
TRIM71Q2Q1W2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
TRIM71Q2Q1W2 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.08□□□□□ -1.28
TRIM71Q2Q1W2 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms