Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CCDC27Q2M243 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CCDC27Q2M243 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CCDC27Q2M243 BX664727.1-201ENST00000416024 466 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 SPATA20P1-201ENST00000423089 438 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 GAPDHP20-201ENST00000444107 1007 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 RPL7P33-201ENST00000444159 742 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 RN7SL655P-201ENST00000486087 298 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC018639.1-201ENST00000492994 442 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 RNA5SP96-201ENST00000516041 107 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 SNRPCP6-201ENST00000528310 210 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AP003066.2-201ENST00000529375 555 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 PHBP2-201ENST00000532859 806 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 MIR744-201ENST00000578242 98 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC079880.2-201ENST00000603790 1213 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AL357094.1-201ENST00000603845 844 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 MIR6070-201ENST00000613967 103 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 MIR6883-201ENST00000614952 78 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 AC093875.1-201ENST00000623688 504 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 OR6C71P-202ENST00000641886 1107 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 MAPK10-383ENST00000642032 3390 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CCDC27Q2M243 CA1-225ENST00000626824 2405 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
CCDC27Q2M243 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
CCDC27Q2M243 NAMPTP1-201ENST00000440465 2514 ntBASIC8.84□□□□□ -0.99
CCDC27Q2M243 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.84□□□□□ -1
CCDC27Q2M243 AC009220.2-201ENST00000489759 1751 ntBASIC8.84□□□□□ -1
CCDC27Q2M243 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 AC092111.1-201ENST00000618256 3358 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AL359715.3-201ENST00000569267 2123 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC8.83□□□□□ -1
CCDC27Q2M243 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.83□□□□□ -1
CCDC27Q2M243 AC010132.2-201ENST00000295493 1043 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 RNFT1P3-201ENST00000340898 1052 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.83□□□□□ -1
CCDC27Q2M243 RPL23AP18-201ENST00000416139 468 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
CCDC27Q2M243 AC000089.1-201ENST00000424559 801 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 MTCO2P23-201ENST00000425216 680 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.83□□□□□ -1
CCDC27Q2M243 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.83□□□□□ -1
CCDC27Q2M243 RPL3P11-201ENST00000434028 1146 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 RPL26P30-201ENST00000453533 435 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 AC104164.3-201ENST00000467363 1258 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 RPS3AP49-201ENST00000472161 790 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AL079303.1-201ENST00000486611 463 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 WDR78-207ENST00000488333 613 ntTSL 3 BASIC8.83□□□□□ -1
CCDC27Q2M243 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC8.83□□□□□ -1
CCDC27Q2M243 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.83□□□□□ -1
CCDC27Q2M243 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.83□□□□□ -1
CCDC27Q2M243 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.83□□□□□ -1
CCDC27Q2M243 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.83□□□□□ -1
CCDC27Q2M243 AL445383.1-201ENST00000554689 874 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AC090666.1-201ENST00000578241 445 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 AC078880.5-201ENST00000617845 421 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 AL354718.1-201ENST00000619764 589 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 AC126544.2-201ENST00000625174 749 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.83□□□□□ -1
CCDC27Q2M243 AL133243.4-201ENST00000623116 3109 ntBASIC8.83□□□□□ -1
CCDC27Q2M243 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
CCDC27Q2M243 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms