Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SNORA43.1-201ENST00000364863 140 ntBASIC7.52□□□□□ -1.2
PDS5AQ29RF7 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.52□□□□□ -1.2
PDS5AQ29RF7 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 GAPDHP23-201ENST00000444823 993 ntBASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 VPS25P1-201ENST00000455691 508 ntBASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AC090568.1-201ENST00000509499 856 ntBASIC7.52□□□□□ -1.2
PDS5AQ29RF7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 SCARNA9-201ENST00000530422 353 ntBASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 MIR3189-201ENST00000578735 73 ntBASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
PDS5AQ29RF7 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 EPS15P1-202ENST00000459691 2071 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 CASC19-238ENST00000641523 1558 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 RNA5SP333-201ENST00000363466 118 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 RNA5SP334-201ENST00000364825 118 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 RNU11-6P-201ENST00000391127 133 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AL353662.1-201ENST00000439099 327 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 TRIM60P16-201ENST00000444048 694 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AC092967.1-201ENST00000449016 481 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 SUMO2P10-201ENST00000452006 288 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AC060775.1-201ENST00000518241 520 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 KCTD9P4-201ENST00000526766 1166 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AL138895.2-201ENST00000603019 178 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AC008555.7-201ENST00000605008 583 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 AC127024.8-201ENST00000623719 2094 ntBASIC7.52□□□□□ -1.21
PDS5AQ29RF7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 AC008627.1-201ENST00000517511 1704 ntBASIC7.51□□□□□ -1.21
PDS5AQ29RF7 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 AC016251.2-201ENST00000623393 3089 ntBASIC7.51□□□□□ -1.21
PDS5AQ29RF7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 TMEM75-201ENST00000624314 2165 ntBASIC7.51□□□□□ -1.21
PDS5AQ29RF7 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 AC022905.1-201ENST00000503430 3048 ntBASIC7.51□□□□□ -1.21
PDS5AQ29RF7 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 VN1R3-201ENST00000418822 919 ntBASIC7.51□□□□□ -1.21
PDS5AQ29RF7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 EIF5AP4-201ENST00000441206 465 ntBASIC7.51□□□□□ -1.21
PDS5AQ29RF7 AC016724.1-201ENST00000453215 421 ntBASIC7.51□□□□□ -1.21
PDS5AQ29RF7 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.51□□□□□ -1.21
PDS5AQ29RF7 Y_RNA.710-201ENST00000516975 110 ntBASIC7.51□□□□□ -1.21
PDS5AQ29RF7 AC027369.2-201ENST00000528030 440 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms