Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 H2AFZP6-201ENST00000444403 394 ntBASIC8.31□□□□□ -1.08
VPS72Q15906 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS72Q15906 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.31□□□□□ -1.08
VPS72Q15906 AC108693.1-201ENST00000496068 432 ntBASIC8.31□□□□□ -1.08
VPS72Q15906 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC8.31□□□□□ -1.08
VPS72Q15906 AC074087.1-201ENST00000512059 724 ntBASIC8.31□□□□□ -1.08
VPS72Q15906 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS72Q15906 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS72Q15906 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.31□□□□□ -1.08
VPS72Q15906 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC8.31□□□□□ -1.08
VPS72Q15906 AC022106.1-201ENST00000612834 766 ntBASIC8.31□□□□□ -1.08
VPS72Q15906 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.31□□□□□ -1.08
VPS72Q15906 CASC19-222ENST00000641321 1173 ntBASIC8.31□□□□□ -1.08
VPS72Q15906 C4BPAP1-201ENST00000415474 1893 ntBASIC8.31□□□□□ -1.08
VPS72Q15906 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
VPS72Q15906 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VPS72Q15906 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
VPS72Q15906 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
VPS72Q15906 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
VPS72Q15906 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
VPS72Q15906 AC241584.2-201ENST00000637142 2090 ntBASIC8.31□□□□□ -1.08
VPS72Q15906 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.31□□□□□ -1.08
VPS72Q15906 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.31□□□□□ -1.08
VPS72Q15906 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VPS72Q15906 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
VPS72Q15906 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VPS72Q15906 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS72Q15906 CCDC162P-202ENST00000368966 6751 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VPS72Q15906 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
VPS72Q15906 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VPS72Q15906 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS72Q15906 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
VPS72Q15906 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
VPS72Q15906 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VPS72Q15906 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
VPS72Q15906 SNORA64.1-201ENST00000362600 132 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 OR2AT2P-201ENST00000413438 905 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 RPL35AP31-201ENST00000418340 337 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 AC006455.6-201ENST00000426192 893 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 AC245884.2-201ENST00000426257 404 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC8.3□□□□□ -1.08
VPS72Q15906 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC8.3□□□□□ -1.08
VPS72Q15906 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.3□□□□□ -1.08
VPS72Q15906 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS72Q15906 OTX2P1-201ENST00000450956 354 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC8.3□□□□□ -1.08
VPS72Q15906 SIAH1P1-201ENST00000479411 923 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 AC026826.1-201ENST00000493002 361 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 WBP1LP3-201ENST00000523033 208 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC8.3□□□□□ -1.08
VPS72Q15906 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS72Q15906 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.3□□□□□ -1.08
VPS72Q15906 AP001496.3-201ENST00000580230 913 ntBASIC8.3□□□□□ -1.08
VPS72Q15906 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.3□□□□□ -1.08
VPS72Q15906 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
VPS72Q15906 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC8.3□□□□□ -1.08
VPS72Q15906 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS72Q15906 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.3□□□□□ -1.08
VPS72Q15906 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VPS72Q15906 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
VPS72Q15906 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
VPS72Q15906 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.3□□□□□ -1.08
VPS72Q15906 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
VPS72Q15906 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 CCNT2P1-201ENST00000423082 1315 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
VPS72Q15906 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
VPS72Q15906 AL590763.1-201ENST00000398297 1545 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
VPS72Q15906 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
VPS72Q15906 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
VPS72Q15906 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.29□□□□□ -1.08
VPS72Q15906 RFESDP1-201ENST00000422350 461 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 MORF4L1P4-201ENST00000450245 976 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS72Q15906 AC093763.2-201ENST00000505334 1223 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.29□□□□□ -1.08
VPS72Q15906 AC024940.4-201ENST00000605507 246 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 MRPL57P1-201ENST00000621486 265 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 AC004808.2-201ENST00000627965 773 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 PFKM-232ENST00000629846 381 ntTSL 4 BASIC8.29□□□□□ -1.08
VPS72Q15906 OR4C1P-202ENST00000641065 1569 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 AC022325.1-201ENST00000502748 2199 ntBASIC8.29□□□□□ -1.08
VPS72Q15906 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
VPS72Q15906 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.29□□□□□ -1.08
VPS72Q15906 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
VPS72Q15906 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
VPS72Q15906 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
VPS72Q15906 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.28□□□□□ -1.08
VPS72Q15906 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms