Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDH1Q08174 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 MRPS17P1-201ENST00000596009 3130 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AL359396.1-201ENST00000623151 2376 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 TRIM51HP-202ENST00000530412 1823 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDH1Q08174 SNORA70G-201ENST00000383923 142 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 RNU6-31P-201ENST00000384388 108 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 NUS1P4-201ENST00000401550 585 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDH1Q08174 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDH1Q08174 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC092646.1-201ENST00000427142 901 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDH1Q08174 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC231532.1-201ENST00000438584 312 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AL021939.1-201ENST00000441868 886 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AL050341.1-201ENST00000447743 313 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 RNU6-956P-201ENST00000458868 103 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 RN7SL870P-201ENST00000460111 296 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDH1Q08174 RPSAP39-201ENST00000467439 883 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 RN7SL335P-201ENST00000482790 304 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC117392.1-201ENST00000487061 596 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC107956.2-201ENST00000496042 454 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC113430.1-201ENST00000506872 718 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 RN7SKP141-201ENST00000516167 338 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AP002963.1-201ENST00000530590 184 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC063923.2-201ENST00000562158 928 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDH1Q08174 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 SNRPCP20-201ENST00000588011 210 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDH1Q08174 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC006539.2-201ENST00000601729 572 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 BMS1P7-201ENST00000602440 1052 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AL021918.1-201ENST00000603933 236 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AL392112.1-201ENST00000605115 829 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC131235.4-201ENST00000609288 620 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AL592494.3-201ENST00000609485 464 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC109454.4-201ENST00000623411 649 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 Z99129.4-201ENST00000624649 2435 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC090132.1-201ENST00000524071 1480 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
PCDH1Q08174 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 HSPD1P7-201ENST00000447985 1686 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
PCDH1Q08174 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH1Q08174 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC011592.1-201ENST00000624647 3634 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH1Q08174 AC073429.2-201ENST00000569694 1444 ntBASIC7.34□□□□□ -1.23
PCDH1Q08174 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
PCDH1Q08174 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.34□□□□□ -1.24
PCDH1Q08174 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.34□□□□□ -1.24
PCDH1Q08174 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH1Q08174 ENO1P4-201ENST00000416471 1785 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms