Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.16□□□□□ -1.42
CLDN6P56747 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.16□□□□□ -1.42
CLDN6P56747 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.16□□□□□ -1.42
CLDN6P56747 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.16□□□□□ -1.42
CLDN6P56747 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.16□□□□□ -1.42
CLDN6P56747 AC020978.7-201ENST00000575953 1187 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 RN7SL404P-201ENST00000582421 281 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 AL356986.1-201ENST00000604085 341 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.16□□□□□ -1.42
CLDN6P56747 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.16□□□□□ -1.42
CLDN6P56747 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CLDN6P56747 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLDN6P56747 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.16□□□□□ -1.42
CLDN6P56747 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.16□□□□□ -1.42
CLDN6P56747 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.16□□□□□ -1.42
CLDN6P56747 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
CLDN6P56747 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.16□□□□□ -1.42
CLDN6P56747 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CLDN6P56747 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN6P56747 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
CLDN6P56747 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN6P56747 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN6P56747 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN6P56747 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN6P56747 AC130360.2-201ENST00000533477 1556 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN6P56747 AL133243.2-201ENST00000610331 1621 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN6P56747 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CLDN6P56747 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CLDN6P56747 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.15□□□□□ -1.42
CLDN6P56747 AC023490.2-201ENST00000359859 470 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 RNA5SP273-201ENST00000362484 113 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 RNA5SP284-201ENST00000384547 118 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 BMS1P13-201ENST00000417301 885 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.15□□□□□ -1.42
CLDN6P56747 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN6P56747 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.15□□□□□ -1.42
CLDN6P56747 BMS1P10-201ENST00000443754 1120 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 AL161636.2-201ENST00000445179 927 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN6P56747 VPS25P1-201ENST00000455691 508 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CLDN6P56747 RPL23AP64-201ENST00000469465 435 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN6P56747 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.15□□□□□ -1.42
CLDN6P56747 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.15□□□□□ -1.42
CLDN6P56747 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN6P56747 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN6P56747 AC004232.1-201ENST00000571388 208 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.15□□□□□ -1.42
CLDN6P56747 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.15□□□□□ -1.42
CLDN6P56747 AC073389.3-201ENST00000609434 935 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 AL512652.1-201ENST00000619006 500 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 AC127024.6-201ENST00000621598 424 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 AC004014.2-201ENST00000623718 5122 ntBASIC6.15□□□□□ -1.42
CLDN6P56747 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CLDN6P56747 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN6P56747 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CLDN6P56747 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.15□□□□□ -1.43
CLDN6P56747 AL359195.2-201ENST00000623657 4412 ntBASIC6.15□□□□□ -1.43
CLDN6P56747 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLDN6P56747 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.15□□□□□ -1.43
CLDN6P56747 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLDN6P56747 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CLDN6P56747 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.43
CLDN6P56747 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.15□□□□□ -1.43
CLDN6P56747 PSG10P-201ENST00000501199 1500 ntBASIC6.15□□□□□ -1.43
CLDN6P56747 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 EPS15P1-202ENST00000459691 2071 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 AC241584.2-201ENST00000637142 2090 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.14□□□□□ -1.43
CLDN6P56747 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.14□□□□□ -1.43
CLDN6P56747 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 SAGE3P-201ENST00000619800 1635 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.14□□□□□ -1.43
CLDN6P56747 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CLDN6P56747 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
CLDN6P56747 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 AL049697.3-201ENST00000406493 982 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLDN6P56747 PSMC1P2-201ENST00000423961 1204 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN6P56747 RPL36AP39-201ENST00000445859 318 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 RPS26P39-201ENST00000469206 341 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 RN7SL369P-201ENST00000477138 299 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 AC096754.1-201ENST00000508904 818 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 RNA5SP438-201ENST00000516561 112 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN6P56747 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN6P56747 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 FXNP1-201ENST00000555153 337 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms