Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
GFRA1P56159 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.61□□□□□ -1.35
GFRA1P56159 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 AC023818.2-201ENST00000623817 2304 ntBASIC6.61□□□□□ -1.35
GFRA1P56159 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
GFRA1P56159 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
GFRA1P56159 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 AL023806.3-201ENST00000638502 2704 ntBASIC6.61□□□□□ -1.35
GFRA1P56159 AC073055.1-201ENST00000456901 1621 ntBASIC6.61□□□□□ -1.35
GFRA1P56159 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
GFRA1P56159 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.61□□□□□ -1.35
GFRA1P56159 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
GFRA1P56159 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 VN2R3P-201ENST00000422626 1412 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC125232.1-201ENST00000452554 1408 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 AC092111.2-201ENST00000611627 1414 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC111188.2-201ENST00000529697 1387 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 OR51A10P-201ENST00000307165 937 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
GFRA1P56159 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 NACA3P-201ENST00000359690 648 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 Y_RNA.505-201ENST00000384489 102 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
GFRA1P56159 OR7E156P-201ENST00000400303 464 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 MTND4P22-201ENST00000413116 1169 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC093084.1-201ENST00000424233 687 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 AL445567.1-201ENST00000439121 144 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 AL158214.1-201ENST00000444423 404 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC007327.1-201ENST00000447461 264 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AURKAPS1-201ENST00000451805 1212 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC073387.1-201ENST00000453261 709 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 MRPL42P4-201ENST00000453267 443 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AL035407.2-201ENST00000454090 378 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC092754.2-201ENST00000463506 460 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 AC113347.3-201ENST00000509113 148 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 RNU6-1308P-201ENST00000516817 103 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC011611.6-201ENST00000547483 255 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 NF1P12-201ENST00000549593 583 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.6□□□□□ -1.35
GFRA1P56159 RN7SL689P-201ENST00000577215 297 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC011193.2-201ENST00000582638 367 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC090774.2-201ENST00000584708 322 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC090241.1-201ENST00000587732 621 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC018690.1-201ENST00000608144 626 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 AL354976.1-201ENST00000613843 387 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.6□□□□□ -1.35
GFRA1P56159 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 AP004607.9-201ENST00000618202 316 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AC025262.3-201ENST00000623666 360 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 AL590396.3-201ENST00000636334 300 ntBASIC6.6□□□□□ -1.35
GFRA1P56159 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.6□□□□□ -1.35
GFRA1P56159 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms