Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.23□□□□□ -1.25
HMGCS2P54868 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.23□□□□□ -1.25
HMGCS2P54868 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.23□□□□□ -1.25
HMGCS2P54868 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.23□□□□□ -1.25
HMGCS2P54868 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
HMGCS2P54868 AC020978.7-201ENST00000575953 1187 ntBASIC7.23□□□□□ -1.25
HMGCS2P54868 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.23□□□□□ -1.25
HMGCS2P54868 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.23□□□□□ -1.25
HMGCS2P54868 MIR6768-201ENST00000610734 72 ntBASIC7.23□□□□□ -1.25
HMGCS2P54868 AL136228.1-201ENST00000622221 319 ntBASIC7.23□□□□□ -1.25
HMGCS2P54868 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.23□□□□□ -1.25
HMGCS2P54868 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.23□□□□□ -1.25
HMGCS2P54868 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.23□□□□□ -1.25
HMGCS2P54868 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.23□□□□□ -1.25
HMGCS2P54868 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HMGCS2P54868 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
HMGCS2P54868 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
HMGCS2P54868 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 AF287957.1-201ENST00000607368 1595 ntBASIC7.22□□□□□ -1.25
HMGCS2P54868 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 MIR323A-201ENST00000362199 86 ntBASIC7.22□□□□□ -1.25
HMGCS2P54868 RN7SKP292-201ENST00000365522 317 ntBASIC7.22□□□□□ -1.25
HMGCS2P54868 Z68694.1-201ENST00000413929 841 ntBASIC7.22□□□□□ -1.25
HMGCS2P54868 VDAC1P2-201ENST00000423609 850 ntBASIC7.22□□□□□ -1.25
HMGCS2P54868 FTLP8-201ENST00000446770 267 ntBASIC7.22□□□□□ -1.25
HMGCS2P54868 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.22□□□□□ -1.25
HMGCS2P54868 SCARNA9-201ENST00000530422 353 ntBASIC7.22□□□□□ -1.25
HMGCS2P54868 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 AC015818.6-201ENST00000584274 634 ntBASIC7.22□□□□□ -1.25
HMGCS2P54868 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.22□□□□□ -1.25
HMGCS2P54868 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.22□□□□□ -1.25
HMGCS2P54868 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.22□□□□□ -1.25
HMGCS2P54868 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
HMGCS2P54868 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HMGCS2P54868 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
HMGCS2P54868 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
HMGCS2P54868 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
HMGCS2P54868 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HMGCS2P54868 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HMGCS2P54868 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HMGCS2P54868 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
HMGCS2P54868 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
HMGCS2P54868 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.21□□□□□ -1.25
HMGCS2P54868 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.21□□□□□ -1.26
HMGCS2P54868 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HMGCS2P54868 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.21□□□□□ -1.26
HMGCS2P54868 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
HMGCS2P54868 RNA5SP242-201ENST00000364171 118 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.21□□□□□ -1.26
HMGCS2P54868 AL050335.1-201ENST00000396909 869 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 AL096711.1-201ENST00000404780 554 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 RPL35AP31-201ENST00000418340 337 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 PCBP2P1-201ENST00000437262 977 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.21□□□□□ -1.26
HMGCS2P54868 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.21□□□□□ -1.26
HMGCS2P54868 VPS25P1-201ENST00000455691 508 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 RANP2-201ENST00000456833 229 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 AC074386.1-201ENST00000476560 767 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 RN7SL284P-201ENST00000498823 275 ntBASIC7.21□□□□□ -1.26
HMGCS2P54868 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.21□□□□□ -1.26
HMGCS2P54868 SCARNA18.1-201ENST00000516330 83 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms