Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.93□□□□□ -1.3
CLCN3P51790 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
CLCN3P51790 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.93□□□□□ -1.3
CLCN3P51790 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.93□□□□□ -1.3
CLCN3P51790 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 AC089998.1-201ENST00000548575 3141 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
CLCN3P51790 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 AC104162.1-201ENST00000430831 2382 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.93□□□□□ -1.3
CLCN3P51790 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
CLCN3P51790 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 AC004386.1-201ENST00000393214 761 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.93□□□□□ -1.3
CLCN3P51790 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.93□□□□□ -1.3
CLCN3P51790 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.93□□□□□ -1.3
CLCN3P51790 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.93□□□□□ -1.3
CLCN3P51790 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.93□□□□□ -1.3
CLCN3P51790 IGLV3-4-201ENST00000432300 244 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 EIF5AP4-201ENST00000441206 465 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.93□□□□□ -1.3
CLCN3P51790 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.93□□□□□ -1.3
CLCN3P51790 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.93□□□□□ -1.3
CLCN3P51790 AC098799.1-201ENST00000504752 800 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 AL158068.1-201ENST00000506116 616 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 LDHAP1-201ENST00000509421 992 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.93□□□□□ -1.3
CLCN3P51790 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.93□□□□□ -1.3
CLCN3P51790 AC015982.1-201ENST00000608113 465 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 AC092681.3-201ENST00000609463 678 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 AC092266.1-201ENST00000610958 165 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 AL512652.1-201ENST00000619006 500 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CLCN3P51790 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CLCN3P51790 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.93□□□□□ -1.3
CLCN3P51790 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLCN3P51790 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.92□□□□□ -1.3
CLCN3P51790 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 HSPD1P9-201ENST00000420325 1636 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 UGT2B27P-201ENST00000505092 1620 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.92□□□□□ -1.3
CLCN3P51790 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CLCN3P51790 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.92□□□□□ -1.3
CLCN3P51790 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.92□□□□□ -1.3
CLCN3P51790 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 Y_RNA.710-201ENST00000516975 110 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.92□□□□□ -1.3
CLCN3P51790 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.92□□□□□ -1.3
CLCN3P51790 AP001858.2-201ENST00000536213 601 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 AC009120.3-201ENST00000563335 499 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.92□□□□□ -1.3
CLCN3P51790 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.92□□□□□ -1.3
CLCN3P51790 AL138895.2-201ENST00000603019 178 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 AP001823.1-201ENST00000604056 1003 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.92□□□□□ -1.3
CLCN3P51790 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 AC073862.4-201ENST00000622982 854 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 AC022400.9-201ENST00000623633 273 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CLCN3P51790 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.92□□□□□ -1.3
CLCN3P51790 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.92□□□□□ -1.3
CLCN3P51790 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CLCN3P51790 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLCN3P51790 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.92□□□□□ -1.3
CLCN3P51790 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.91□□□□□ -1.3
CLCN3P51790 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CLCN3P51790 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CLCN3P51790 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CLCN3P51790 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLCN3P51790 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLCN3P51790 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.91□□□□□ -1.3
CLCN3P51790 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CLCN3P51790 RNU1-49P-201ENST00000363468 159 ntBASIC6.91□□□□□ -1.3
CLCN3P51790 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms