Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC236972.4-201ENST00000458091 963 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.31□□□□□ -1.4
HNF4AP41235 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.31□□□□□ -1.4
HNF4AP41235 AC016687.1-201ENST00000482574 353 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 RPL17P2-201ENST00000491913 451 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.31□□□□□ -1.4
HNF4AP41235 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.31□□□□□ -1.4
HNF4AP41235 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.31□□□□□ -1.4
HNF4AP41235 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 IGHV1-14-201ENST00000523391 241 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.31□□□□□ -1.4
HNF4AP41235 RPL29P33-201ENST00000587474 316 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.31□□□□□ -1.4
HNF4AP41235 AL390877.1-201ENST00000605704 214 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 CLUHP10-201ENST00000631979 980 ntBASIC6.31□□□□□ -1.4
HNF4AP41235 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
HNF4AP41235 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.31□□□□□ -1.4
HNF4AP41235 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HNF4AP41235 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.31□□□□□ -1.4
HNF4AP41235 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.31□□□□□ -1.4
HNF4AP41235 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 NEK2P2-201ENST00000438441 1338 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HNF4AP41235 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.3□□□□□ -1.4
HNF4AP41235 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.3□□□□□ -1.4
HNF4AP41235 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.3□□□□□ -1.4
HNF4AP41235 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 AL353763.1-201ENST00000624467 1628 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
HNF4AP41235 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.3□□□□□ -1.4
HNF4AP41235 U3.52-201ENST00000384034 216 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.3□□□□□ -1.4
HNF4AP41235 ARSFP1-201ENST00000398758 477 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 RANP6-201ENST00000413691 644 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.3□□□□□ -1.4
HNF4AP41235 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.3□□□□□ -1.4
HNF4AP41235 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.3□□□□□ -1.4
HNF4AP41235 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.3□□□□□ -1.4
HNF4AP41235 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.3□□□□□ -1.4
HNF4AP41235 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.3□□□□□ -1.4
HNF4AP41235 AC023310.2-201ENST00000553844 547 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.3□□□□□ -1.4
HNF4AP41235 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 AC115989.2-201ENST00000578640 563 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 MIR5010-201ENST00000582846 120 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 RPL7AP69-201ENST00000595306 806 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 U91328.4-201ENST00000608919 517 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 U1.41-201ENST00000617626 165 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 TCL6_3.1-201ENST00000619064 137 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 RAB28P4-201ENST00000622233 665 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 AL132640.3-201ENST00000630473 177 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.3□□□□□ -1.4
HNF4AP41235 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HNF4AP41235 AC011455.2-201ENST00000599320 3336 ntBASIC6.3□□□□□ -1.4
HNF4AP41235 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.3□□□□□ -1.4
HNF4AP41235 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HNF4AP41235 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.29□□□□□ -1.4
HNF4AP41235 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.29□□□□□ -1.4
HNF4AP41235 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.29□□□□□ -1.4
HNF4AP41235 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.29□□□□□ -1.4
HNF4AP41235 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 PPIAP24-201ENST00000328558 471 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 RNU1-5P-201ENST00000362684 144 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 MRPS6P2-201ENST00000381143 370 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HNF4AP41235 AC026310.1-201ENST00000396004 378 ntBASIC6.29□□□□□ -1.4
HNF4AP41235 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms