Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC12P31275 AC246680.2-201ENST00000422106 389 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC12P31275 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.71□□□□□ -1.34
HOXC12P31275 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC12P31275 AL137074.1-201ENST00000442640 465 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 MTCYBP42-201ENST00000444653 1130 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 RPL34P26-201ENST00000445636 354 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.71□□□□□ -1.34
HOXC12P31275 CCNJP1-201ENST00000450600 1149 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 OR2AF1P-201ENST00000454899 889 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 RN7SL58P-201ENST00000473445 294 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 AC233724.1-201ENST00000503894 233 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AC025459.1-201ENST00000504072 156 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AC119751.1-201ENST00000513357 765 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC12P31275 HMGB1P1-201ENST00000522557 636 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 AP003461.1-201ENST00000528866 78 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC12P31275 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 OR7E87P-201ENST00000532397 929 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.71□□□□□ -1.34
HOXC12P31275 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.71□□□□□ -1.34
HOXC12P31275 COX6CP11-201ENST00000555293 229 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC12P31275 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC12P31275 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 OR7E94P-202ENST00000601375 790 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.71□□□□□ -1.34
HOXC12P31275 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 AC080112.3-201ENST00000612552 880 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 AL158062.1-201ENST00000619632 745 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AC106782.7-201ENST00000624024 418 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AC133555.5-201ENST00000624430 418 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 AC103706.2-201ENST00000638080 240 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HOXC12P31275 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HOXC12P31275 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
HOXC12P31275 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HOXC12P31275 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC12P31275 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.7□□□□□ -1.34
HOXC12P31275 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HOXC12P31275 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 SNORD65C-201ENST00000390962 71 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 ATP5HP3-201ENST00000396994 486 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 OOSP1-201ENST00000398992 1270 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 DNAJC19P6-201ENST00000401853 280 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AL078595.1-201ENST00000404458 226 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AL590084.1-201ENST00000407885 387 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 RN7SKP30-201ENST00000411373 334 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 AL031779.1-201ENST00000415663 330 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC092042.2-201ENST00000417304 331 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 GAPDHP73-201ENST00000423411 1007 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 DDX11L10-201ENST00000430178 571 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 VDAC2P3-201ENST00000430995 828 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 Z84478.1-201ENST00000438230 1219 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 MTND1P34-201ENST00000438556 671 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 FGF7P5-201ENST00000441829 291 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.7□□□□□ -1.34
HOXC12P31275 AC118469.1-201ENST00000442943 488 ntBASIC6.7□□□□□ -1.34
HOXC12P31275 AL592437.1-201ENST00000443781 492 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms