Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 Y_RNA.11-201ENST00000362375 109 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 U3.4-201ENST00000363352 213 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 RNU1-87P-201ENST00000363727 170 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 SNORD46-201ENST00000364043 104 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 Y_RNA.303-201ENST00000364998 94 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
NFKB1P19838 Y_RNA.465-201ENST00000384293 102 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 CES5AP1-201ENST00000400418 859 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.72□□□□□ -1.17
NFKB1P19838 RNU6-920P-201ENST00000410926 92 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 MED15P8-201ENST00000411601 545 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 CRIP1P3-201ENST00000416794 220 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 CCDC58P2-201ENST00000417131 366 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AL022100.1-202ENST00000421214 548 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 FTH1P20-201ENST00000434913 548 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.72□□□□□ -1.17
NFKB1P19838 IGBP1P3-201ENST00000447449 1000 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 PRELID1P3-201ENST00000450055 643 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.72□□□□□ -1.17
NFKB1P19838 CST12P-201ENST00000457644 362 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC107015.1-201ENST00000466902 747 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 RN7SL414P-201ENST00000469545 294 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 RN7SL685P-201ENST00000476271 298 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 RN7SL635P-201ENST00000492123 296 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 RN7SL869P-201ENST00000497032 300 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 RN7SL124P-201ENST00000498656 285 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.72□□□□□ -1.17
NFKB1P19838 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 MYL12BP2-201ENST00000503948 512 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC113347.3-201ENST00000509113 148 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC233724.10-201ENST00000510454 409 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC116347.2-201ENST00000514912 523 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 FABP5P5-201ENST00000515537 406 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.72□□□□□ -1.17
NFKB1P19838 AC100823.2-201ENST00000518337 699 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.72□□□□□ -1.17
NFKB1P19838 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.72□□□□□ -1.17
NFKB1P19838 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 AP000619.1-201ENST00000540293 1000 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 CHCHD3P2-201ENST00000550751 639 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AL355076.3-201ENST00000555838 587 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.72□□□□□ -1.17
NFKB1P19838 AADACP1-206ENST00000561502 1193 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.72□□□□□ -1.17
NFKB1P19838 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.72□□□□□ -1.17
NFKB1P19838 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.72□□□□□ -1.17
NFKB1P19838 WISP1-OT1-201ENST00000602893 642 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AL049840.6-201ENST00000604583 345 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 LSM1P2-201ENST00000604911 322 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 MIR6732-201ENST00000619365 60 ntBASIC7.72□□□□□ -1.17
NFKB1P19838 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.72□□□□□ -1.17
NFKB1P19838 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.72□□□□□ -1.17
NFKB1P19838 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.72□□□□□ -1.17
NFKB1P19838 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
NFKB1P19838 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
NFKB1P19838 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
NFKB1P19838 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.71□□□□□ -1.17
NFKB1P19838 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.71□□□□□ -1.17
NFKB1P19838 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
NFKB1P19838 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NFKB1P19838 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
NFKB1P19838 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
NFKB1P19838 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NFKB1P19838 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.71□□□□□ -1.18
NFKB1P19838 AL672167.1-206ENST00000356293 943 ntBASIC7.71□□□□□ -1.18
NFKB1P19838 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NFKB1P19838 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.71□□□□□ -1.18
NFKB1P19838 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
NFKB1P19838 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
NFKB1P19838 SNORA40.2-201ENST00000390847 128 ntBASIC7.71□□□□□ -1.18
NFKB1P19838 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NFKB1P19838 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.71□□□□□ -1.18
NFKB1P19838 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.71□□□□□ -1.18
NFKB1P19838 AC023141.10-201ENST00000415634 200 ntBASIC7.71□□□□□ -1.18
NFKB1P19838 OR4K6P-201ENST00000416478 897 ntBASIC7.71□□□□□ -1.18
NFKB1P19838 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.71□□□□□ -1.18
NFKB1P19838 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NFKB1P19838 RPS27AP7-201ENST00000422792 455 ntBASIC7.71□□□□□ -1.18
NFKB1P19838 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.71□□□□□ -1.18
NFKB1P19838 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.71□□□□□ -1.18
NFKB1P19838 DDX11L10-201ENST00000430178 571 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms