Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 NRBF2P2-201ENST00000413087 861 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC3.76□□□□□ -1.81
PKHD1P08F94 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 CUBNP2-201ENST00000443534 1139 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 AL035090.1-201ENST00000454835 332 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 OR6M2P-201ENST00000529831 871 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC3.76□□□□□ -1.81
PKHD1P08F94 MIR4646-201ENST00000580775 63 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 DYNC1I2P1-201ENST00000435916 1838 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PKHD1P08F94 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PKHD1P08F94 CLCA3P-203ENST00000490028 2781 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PKHD1P08F94 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC3.76□□□□□ -1.81
PKHD1P08F94 DEPDC5-201ENST00000382111 5212 ntTSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PKHD1P08F94 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PKHD1P08F94 AL139128.1-201ENST00000413921 941 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.76□□□□□ -1.81
PKHD1P08F94 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC3.76□□□□□ -1.81
PKHD1P08F94 AC073594.1-201ENST00000462065 364 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.76□□□□□ -1.81
PKHD1P08F94 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.76□□□□□ -1.81
PKHD1P08F94 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC3.76□□□□□ -1.81
PKHD1P08F94 AL110118.1-201ENST00000553543 400 ntBASIC3.76□□□□□ -1.81
PKHD1P08F94 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PKHD1P08F94 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
PKHD1P08F94 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC3.76□□□□□ -1.81
PKHD1P08F94 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PKHD1P08F94 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PKHD1P08F94 GAPDHP24-201ENST00000328713 983 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PKHD1P08F94 AC009804.1-201ENST00000400949 179 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 U3.36-201ENST00000408418 213 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 RPL7L1P9-201ENST00000431298 745 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.75□□□□□ -1.81
PKHD1P08F94 EIF3FP1-201ENST00000613970 806 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 MIR7641-1-201ENST00000627518 61 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.75□□□□□ -1.81
PKHD1P08F94 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC3.75□□□□□ -1.81
PKHD1P08F94 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
PKHD1P08F94 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 SLC35E1P1-201ENST00000419313 864 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 AC016027.4-201ENST00000450866 277 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC3.75□□□□□ -1.81
PKHD1P08F94 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 AP000662.1-201ENST00000530952 487 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 IGBP1P1-201ENST00000554337 1009 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC3.75□□□□□ -1.81
PKHD1P08F94 MIR5096-201ENST00000583713 70 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.75□□□□□ -1.81
PKHD1P08F94 AC003992.1-201ENST00000635364 557 ntBASIC3.75□□□□□ -1.81
PKHD1P08F94 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PKHD1P08F94 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC3.75□□□□□ -1.81
PKHD1P08F94 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
PKHD1P08F94 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PKHD1P08F94 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms