Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.5□□□□□ -1.37
PDGFBP01127 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.5□□□□□ -1.37
PDGFBP01127 RPA2P1-201ENST00000556557 721 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 AC093524.1-201ENST00000564266 1094 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFBP01127 MRPS21P9-201ENST00000571150 257 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.5□□□□□ -1.37
PDGFBP01127 AC087575.1-201ENST00000585087 229 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 AC245014.3-201ENST00000618589 347 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 ABCA11P-202ENST00000504019 2110 ntBASIC6.5□□□□□ -1.37
PDGFBP01127 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.5□□□□□ -1.37
PDGFBP01127 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDGFBP01127 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.49□□□□□ -1.37
PDGFBP01127 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFBP01127 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 ZNF812P-201ENST00000457674 1694 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 AL132656.3-201ENST00000606384 1595 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFBP01127 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
PDGFBP01127 TRAV35-201ENST00000390462 330 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 AL121835.1-201ENST00000404250 354 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 BX119321.1-201ENST00000428912 797 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 FTH1P10-202ENST00000430907 550 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 AL627308.1-201ENST00000435693 821 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFBP01127 CFL1P4-201ENST00000451536 498 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 RPSAP37-201ENST00000470913 821 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 RPS4XP23-201ENST00000487801 237 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 RN7SL193P-201ENST00000491708 276 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 RNA5SP434-201ENST00000516647 121 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFBP01127 GTF2IP11-201ENST00000526931 420 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFBP01127 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.49□□□□□ -1.37
PDGFBP01127 AL513218.1-201ENST00000606527 391 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.49□□□□□ -1.37
PDGFBP01127 AP000577.1-201ENST00000624366 878 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 AC073488.2-201ENST00000631903 751 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.49□□□□□ -1.37
PDGFBP01127 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PDGFBP01127 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PDGFBP01127 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
PDGFBP01127 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.49□□□□□ -1.37
PDGFBP01127 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.49□□□□□ -1.37
PDGFBP01127 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDGFBP01127 AL021877.2-201ENST00000624442 10684 ntBASIC6.49□□□□□ -1.37
PDGFBP01127 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFBP01127 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFBP01127 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PDGFBP01127 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 AL133243.2-201ENST00000610331 1621 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 OR3A2-201ENST00000408891 1076 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 AC244452.1-201ENST00000413798 141 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 AC010740.1-201ENST00000417035 684 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PDGFBP01127 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC130360.1-201ENST00000425489 1117 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms