Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NKX2-2O95096 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
NKX2-2O95096 VIM2P-201ENST00000402383 1294 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AC019070.1-201ENST00000415008 1024 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AL512504.1-201ENST00000415494 778 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AL645939.3-201ENST00000435408 225 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 RAB9AP5-201ENST00000437794 597 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.96□□□□□ -1.46
NKX2-2O95096 RAB9AP2-201ENST00000443911 597 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AC017099.1-201ENST00000448261 1028 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.96□□□□□ -1.46
NKX2-2O95096 PPIAP32-201ENST00000449940 472 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AL445991.1-201ENST00000450381 475 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.96□□□□□ -1.46
NKX2-2O95096 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
NKX2-2O95096 RN7SL502P-201ENST00000481857 290 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AC106800.3-201ENST00000511389 308 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AC093664.1-201ENST00000511779 289 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.96□□□□□ -1.46
NKX2-2O95096 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.96□□□□□ -1.46
NKX2-2O95096 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AC023968.1-201ENST00000560719 475 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AL731537.2-201ENST00000561565 951 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AC022001.1-201ENST00000605193 268 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AC211486.4-201ENST00000621495 113 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.96□□□□□ -1.46
NKX2-2O95096 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.96□□□□□ -1.46
NKX2-2O95096 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.96□□□□□ -1.46
NKX2-2O95096 AC016251.2-201ENST00000623393 3089 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.96□□□□□ -1.46
NKX2-2O95096 ZNF101P1-201ENST00000435701 1720 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NKX2-2O95096 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NKX2-2O95096 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.96□□□□□ -1.46
NKX2-2O95096 TMEM75-201ENST00000624314 2165 ntBASIC5.96□□□□□ -1.46
NKX2-2O95096 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NKX2-2O95096 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.96□□□□□ -1.46
NKX2-2O95096 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NKX2-2O95096 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NKX2-2O95096 CUBNP3-201ENST00000457461 1784 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.95□□□□□ -1.46
NKX2-2O95096 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.95□□□□□ -1.46
NKX2-2O95096 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC011592.1-201ENST00000624647 3634 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NKX2-2O95096 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 SNORD16-201ENST00000362803 99 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 SNORD35A-201ENST00000363389 86 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 RNA5SP85-201ENST00000365378 119 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.95□□□□□ -1.46
NKX2-2O95096 RN7SKP281-201ENST00000410472 352 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC106901.1-201ENST00000425086 698 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 AC125238.2-201ENST00000430003 1440 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AL355355.1-201ENST00000442900 793 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX2-2O95096 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC022034.1-201ENST00000512867 2156 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 COX6B1P4-201ENST00000519826 484 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX2-2O95096 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 AP005639.1-201ENST00000526939 192 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC024267.2-201ENST00000582737 417 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms