Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 RNA5SP429-201ENST00000363688 109 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PDLIM1O00151 RNA5SP187-201ENST00000384400 119 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AL121977.1-201ENST00000401636 979 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PDLIM1O00151 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 SUMO2P8-201ENST00000434672 286 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 CHCHD4P5-201ENST00000436684 427 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 MYL6P3-201ENST00000436904 432 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 SLAMF6P1-201ENST00000451067 602 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 RN7SL868P-201ENST00000485915 303 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 MTCO1P55-201ENST00000489829 745 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 AL035690.1-201ENST00000490892 383 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AC017007.1-201ENST00000511960 415 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 AC114940.1-201ENST00000512162 1265 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 AC096661.1-201ENST00000515870 822 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 IGHV1-14-201ENST00000523391 241 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AC069240.2-201ENST00000550242 609 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 AC024589.2-201ENST00000605642 1294 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 Z93930.3-201ENST00000607919 749 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 Z95327.3-201ENST00000610385 572 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 AC004241.2-201ENST00000614562 444 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM1O00151 AC140479.4-205ENST00000636339 820 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 AC022613.3-201ENST00000560740 1346 ntBASIC6.13□□□□□ -1.43
PDLIM1O00151 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.13□□□□□ -1.43
PDLIM1O00151 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM1O00151 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.13□□□□□ -1.43
PDLIM1O00151 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDLIM1O00151 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.13□□□□□ -1.43
PDLIM1O00151 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PDLIM1O00151 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM1O00151 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM1O00151 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM1O00151 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM1O00151 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM1O00151 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PDLIM1O00151 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM1O00151 RNU1-55P-201ENST00000365510 158 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM1O00151 AL121835.1-201ENST00000404250 354 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 RN7SKP161-201ENST00000411110 305 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 SETP22-201ENST00000412243 957 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM1O00151 Z68868.1-201ENST00000429048 544 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 USP9YP3-201ENST00000434481 1766 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM1O00151 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM1O00151 GOT2P2-201ENST00000450663 1251 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 RPL23AP64-201ENST00000469465 435 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 PPP1R2P6-201ENST00000478565 588 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM1O00151 AC093719.1-201ENST00000480427 441 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.12□□□□□ -1.43
PDLIM1O00151 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM1O00151 IGLC4-201ENST00000517690 248 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.12□□□□□ -1.43
PDLIM1O00151 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM1O00151 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.12□□□□□ -1.43
PDLIM1O00151 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM1O00151 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDLIM1O00151 AC003985.2-201ENST00000562268 1669 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 NIFKP4-201ENST00000567275 1192 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.12□□□□□ -1.43
PDLIM1O00151 AL121768.1-201ENST00000613917 2544 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 AC005355.2-201ENST00000625064 484 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 AL731532.1-201ENST00000623972 4236 ntBASIC6.12□□□□□ -1.43
PDLIM1O00151 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PDLIM1O00151 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 MIR187-201ENST00000385062 109 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 RPS27AP6-201ENST00000427962 448 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms